#include <InputOutputRealm.h>

Inheritance diagram for sierra::nalu::InputOutputRealm:

Public Types
typedef size_t	SizeType

Public Types inherited from sierra::nalu::Realm
typedef size_t	SizeType

Public Member Functions
	InputOutputRealm (Realms &, const YAML::Node &node)

	~InputOutputRealm ()

void	load (const YAML::Node &node)

void	breadboard ()

void	initialize ()

void	populate_initial_condition ()

void	populate_boundary_data ()

void	boundary_data_to_state_data ()

void	populate_derived_quantities ()

void	evaluate_properties ()

void	initial_work ()

double	compute_adaptive_time_step ()

void	swap_states ()

void	predict_state ()

void	pre_timestep_work ()

void	output_banner ()

void	advance_time_step ()

double	populate_restart (double &timeStepNm1, int &timeStepCount)

void	populate_external_variables_from_input (const double currentTime)

void	register_io_fields ()

Public Member Functions inherited from sierra::nalu::Realm
	Realm (Realms &, const YAML::Node &node)

virtual	~Realm ()

void	look_ahead_and_creation (const YAML::Node &node)

Simulation *	root () const

Simulation *	root ()

Realms *	parent () const

Realms *	parent ()

bool	debug () const

bool	get_activate_memory_diagnostic ()

void	provide_memory_summary ()

std::string	convert_bytes (double bytes)

void	create_mesh ()

void	setup_adaptivity ()

void	setup_nodal_fields ()

void	setup_edge_fields ()

void	setup_element_fields ()

void	setup_interior_algorithms ()

void	setup_post_processing_algorithms ()

void	setup_bc ()

void	enforce_bc_on_exposed_faces ()

void	setup_initial_conditions ()

void	setup_property ()

void	extract_universal_constant (const std::string name, double &value, const bool useDefault)

void	augment_property_map (PropertyIdentifier propID, ScalarFieldType *theField)

void	makeSureNodesHaveValidTopology ()

void	initialize_global_variables ()

void	balance_nodes ()

void	create_output_mesh ()

void	create_restart_mesh ()

void	input_variables_from_mesh ()

void	augment_output_variable_list (const std::string fieldName)

void	augment_restart_variable_list (std::string restartFieldName)

void	create_edges ()

void	provide_entity_count ()

void	delete_edges ()

void	commit ()

void	process_mesh_motion ()

void	compute_centroid_on_parts (std::vector< std::string > partNames, std::vector< double > &centroid)

void	init_current_coordinates ()

std::string	get_coordinates_name ()

bool	has_mesh_motion ()

bool	has_mesh_deformation ()

bool	does_mesh_move ()

bool	has_non_matching_boundary_face_alg ()

bool	query_for_overset ()

void	set_omega (stk::mesh::Part *targetPart, double omega)

void	set_current_displacement (stk::mesh::Part *targetPart, const std::vector< double > &centroidCoords, const std::vector< double > &unitVec)

void	set_current_coordinates (stk::mesh::Part *targetPart)

void	set_mesh_velocity (stk::mesh::Part *targetPart, const std::vector< double > &centroidCoords, const std::vector< double > &unitVec)

void	mesh_velocity_cross_product (double o, double c, double *u)

void	initialize_non_conformal ()

void	initialize_overset ()

void	initialize_post_processing_algorithms ()

void	compute_geometry ()

void	compute_vrtm ()

void	compute_l2_scaling ()

void	output_converged_results ()

void	provide_output ()

void	provide_restart_output ()

void	register_interior_algorithm (stk::mesh::Part *part)

void	register_nodal_fields (stk::mesh::Part *part)

void	register_wall_bc (stk::mesh::Part *part, const stk::topology &theTopo)

void	register_inflow_bc (stk::mesh::Part *part, const stk::topology &theTopo)

void	register_open_bc (stk::mesh::Part *part, const stk::topology &theTopo)

void	register_symmetry_bc (stk::mesh::Part *part, const stk::topology &theTopo)

void	register_periodic_bc (stk::mesh::Part masterMeshPart, stk::mesh::Part slaveMeshPart, const double &searchTolerance, const std::string &searchMethodName)

void	setup_non_conformal_bc (stk::mesh::PartVector currentPartVec, stk::mesh::PartVector opposingPartVec, const NonConformalBoundaryConditionData &nonConformalBCData)

void	register_non_conformal_bc (stk::mesh::Part *part, const stk::topology &theTopo)

void	setup_overset_bc (const OversetBoundaryConditionData &oversetBCData)

void	periodic_field_update (stk::mesh::FieldBase *theField, const unsigned &sizeOfTheField, const bool &bypassFieldCheck=true) const

void	periodic_delta_solution_update (stk::mesh::FieldBase *theField, const unsigned &sizeOfField) const

void	periodic_max_field_update (stk::mesh::FieldBase *theField, const unsigned &sizeOfField) const

const stk::mesh::PartVector &	get_slave_part_vector ()

void	overset_orphan_node_field_update (stk::mesh::FieldBase *theField, const unsigned sizeRow, const unsigned sizeCol)

virtual double	populate_variables_from_input (const double currentTime)

void	set_global_id ()

void	check_job (bool get_node_count)
	check job for fitting in memory More...

void	dump_simulation_time ()

double	provide_mean_norm ()

double	get_hybrid_factor (const std::string dofname)

double	get_alpha_factor (const std::string dofname)

double	get_alpha_upw_factor (const std::string dofname)

double	get_upw_factor (const std::string dofname)

bool	primitive_uses_limiter (const std::string dofname)

double	get_lam_schmidt (const std::string dofname)

double	get_lam_prandtl (const std::string dofname, bool &prProvided)

double	get_turb_schmidt (const std::string dofname)

double	get_turb_prandtl (const std::string dofname)

bool	get_noc_usage (const std::string dofname)

bool	get_shifted_grad_op (const std::string dofname)

double	get_divU ()

std::string	get_tanh_functional_form (const std::string dofname)

double	get_tanh_trans (const std::string dofname)

double	get_tanh_width (const std::string dofname)

bool	get_consistent_mass_matrix_png (const std::string dofname)

double	get_mdot_interp ()

bool	get_cvfem_shifted_mdot ()

bool	get_cvfem_reduced_sens_poisson ()

bool	has_nc_gauss_labatto_quadrature ()

bool	get_nc_alg_upwind_advection ()

bool	get_nc_alg_include_pstab ()

bool	get_nc_alg_current_normal ()

PropertyEvaluator *	get_material_prop_eval (const PropertyIdentifier thePropID)

bool	is_turbulent ()

void	is_turbulent (bool isIt)

bool	needs_enthalpy ()

void	needs_enthalpy (bool needsEnthalpy)

int	number_of_states ()

std::string	name ()

stk::mesh::BucketVector const &	get_buckets (stk::mesh::EntityRank rank, const stk::mesh::Selector &selector, bool get_all=false) const

bool	get_activate_aura ()

stk::mesh::BulkData &	bulk_data ()

stk::mesh::MetaData &	meta_data ()

stk::mesh::Selector	get_inactive_selector ()

void	push_equation_to_systems (EquationSystem *eqSystem)

const std::vector< std::string > &	get_physics_target_names ()

double	get_tanh_blending (const std::string dofName)

void	augment_transfer_vector (Transfer transfer, const std::string transferObjective, Realm toRealm)

void	process_multi_physics_transfer ()

void	process_initialization_transfer ()

void	process_io_transfer ()

void	process_external_data_transfer ()

void	post_converged_work ()

double	get_current_time ()

double	get_time_step ()

double	get_gamma1 ()

double	get_gamma2 ()

double	get_gamma3 ()

int	get_time_step_count () const

double	get_time_step_from_file ()

bool	get_is_fixed_time_step ()

bool	get_is_terminate_based_on_time ()

double	get_total_sim_time ()

int	get_max_time_step_count ()

bool	restarted_simulation ()

bool	support_inconsistent_restart ()

double	get_stefan_boltzmann ()

double	get_turb_model_constant (const TurbulenceModelConstant turbModelEnum)

bool	process_adaptivity ()

void	setup_element_promotion ()

void	promote_mesh ()

void	create_promoted_output_mesh ()

bool	using_SGL_quadrature () const

bool	high_order_active () const

std::string	physics_part_name (std::string) const

std::string	get_quad_type () const

Public Attributes
std::vector< InputOutputInfo * >	inputOutputFieldInfo_

Public Attributes inherited from sierra::nalu::Realm
Realms &	realms_

std::string	name_

std::string	type_

std::string	inputDBName_

unsigned	spatialDimension_

bool	realmUsesEdges_

int	solveFrequency_

bool	isTurbulent_

bool	needsEnthalpy_

double	l2Scaling_

stk::mesh::MetaData *	metaData_

stk::mesh::BulkData *	bulkData_

stk::io::StkMeshIoBroker *	ioBroker_

size_t	resultsFileIndex_

size_t	restartFileIndex_

GlobalIdFieldType *	naluGlobalId_

ComputeGeometryAlgorithmDriver *	computeGeometryAlgDriver_

ErrorIndicatorAlgorithmDriver *	errorIndicatorAlgDriver_

unsigned	numInitialElements_

stk::mesh::Selector	adapterSelector_ [4]

Teuchos::RCP< stk::mesh::Selector >	activePartForIO_

TimeIntegrator *	timeIntegrator_

BoundaryConditions	boundaryConditions_

InitialConditions	initialConditions_

MaterialPropertys	materialPropertys_

EquationSystems	equationSystems_

double	maxCourant_

double	maxReynolds_

double	targetCourant_

double	timeStepChangeFactor_

int	currentNonlinearIteration_

SolutionOptions *	solutionOptions_

OutputInfo *	outputInfo_

PostProcessingInfo *	postProcessingInfo_

SolutionNormPostProcessing *	solutionNormPostProcessing_

TurbulenceAveragingPostProcessing *	turbulenceAveragingPostProcessing_

DataProbePostProcessing *	dataProbePostProcessing_

Actuator *	actuator_

ABLForcingAlgorithm *	ablForcingAlg_

std::vector< Algorithm * >	propertyAlg_

std::map< PropertyIdentifier, ScalarFieldType * >	propertyMap_

std::vector< Algorithm * >	initCondAlg_

SizeType	nodeCount_

bool	estimateMemoryOnly_

double	availableMemoryPerCoreGB_

double	timerCreateMesh_

double	timerPopulateMesh_

double	timerPopulateFieldData_

double	timerOutputFields_

double	timerCreateEdges_

double	timerNonconformal_

double	timerInitializeEqs_

double	timerPropertyEval_

double	timerAdapt_

double	timerTransferSearch_

double	timerTransferExecute_

double	timerSkinMesh_

double	timerPromoteMesh_

NonConformalManager *	nonConformalManager_

OversetManager *	oversetManager_

bool	hasNonConformal_

bool	hasOverset_

bool	hasMultiPhysicsTransfer_

bool	hasInitializationTransfer_

bool	hasIoTransfer_

bool	hasExternalDataTransfer_

PeriodicManager *	periodicManager_

bool	hasPeriodic_

bool	hasFluids_

stk::util::ParameterList	globalParameters_

stk::mesh::Part *	exposedBoundaryPart_

stk::mesh::Part *	edgesPart_

bool	checkForMissingBcs_

bool	isothermalFlow_

bool	uniformFlow_

bool	provideEntityCount_

HDF5FilePtr *	HDF5ptr_

std::string	autoDecompType_

bool	activateAura_

bool	activateMemoryDiagnostic_

bool	supportInconsistentRestart_

bool	doBalanceNodes_

BalanceNodeOptions	balanceNodeOptions_

double	wallTimeStart_

stk::mesh::PartVector	bcPartVec_

stk::mesh::PartVector	emptyPartVector_

stk::mesh::PartVector	basePartVector_

stk::mesh::PartVector	superPartVector_

std::vector< AuxFunctionAlgorithm * >	bcDataAlg_

std::vector< Transfer * >	multiPhysicsTransferVec_

std::vector< Transfer * >	initializationTransferVec_

std::vector< Transfer * >	ioTransferVec_

std::vector< Transfer * >	externalDataTransferVec_

bool	doPromotion_

unsigned	promotionOrder_

size_t	inputMeshIdx_

const YAML::Node &	node_

std::unique_ptr< ElementDescription >	desc_

std::unique_ptr< PromotedElementIO >	promotionIO_

std::vector< std::string >	superTargetNames_

stk::mesh::PartVector	allPeriodicInteractingParts_

stk::mesh::PartVector	allNonConformalInteractingParts_

Member Typedef Documentation

typedef size_t sierra::nalu::InputOutputRealm::SizeType

Constructor & Destructor Documentation

sierra::nalu::InputOutputRealm::InputOutputRealm	(	Realms &	realms,
		const YAML::Node &	node
	)

sierra::nalu::InputOutputRealm::~InputOutputRealm ( )

References inputOutputFieldInfo_.

Member Function Documentation

void sierra::nalu::InputOutputRealm::advance_time_step ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::boundary_data_to_state_data ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::breadboard ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

References initialize().

double sierra::nalu::InputOutputRealm::compute_adaptive_time_step ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::evaluate_properties ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::initial_work ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::initialize ( )

virtual

Reimplemented from sierra::nalu::Realm.

References sierra::nalu::Realm::create_output_mesh(), sierra::nalu::Realm::input_variables_from_mesh(), sierra::nalu::Realm::ioBroker_, and register_io_fields().

void sierra::nalu::InputOutputRealm::load ( const YAML::Node & node )

virtual

Reimplemented from sierra::nalu::Realm.

References sierra::nalu::expect_sequence(), sierra::nalu::InputOutputInfo::fieldName_, sierra::nalu::InputOutputInfo::fieldSize_, sierra::nalu::InputOutputInfo::fieldType_, inputOutputFieldInfo_, sierra::nalu::Realm::load(), and sierra::nalu::InputOutputInfo::targetNames_.

void sierra::nalu::InputOutputRealm::output_banner ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::populate_boundary_data ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::populate_derived_quantities ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::populate_external_variables_from_input ( const double currentTime )

virtual

Reimplemented from sierra::nalu::Realm.

References sierra::nalu::SolutionOptions::inputVarFromFileMap_, sierra::nalu::Realm::ioBroker_, sierra::nalu::NaluEnv::naluOutputP0(), sierra::nalu::Realm::name(), sierra::nalu::NaluEnv::self(), sierra::nalu::Realm::solutionOptions_, and sierra::nalu::Realm::type_.

void sierra::nalu::InputOutputRealm::populate_initial_condition ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

double sierra::nalu::InputOutputRealm::populate_restart	(	double &	timeStepNm1,
		int &	timeStepCount
	)

virtual

Reimplemented from sierra::nalu::Realm.

References sierra::nalu::Realm::get_current_time().

void sierra::nalu::InputOutputRealm::pre_timestep_work ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::predict_state ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

void sierra::nalu::InputOutputRealm::register_io_fields ( )

References inputOutputFieldInfo_, and sierra::nalu::Realm::metaData_.

Referenced by initialize().

void sierra::nalu::InputOutputRealm::swap_states ( )

inlinevirtual

Reimplemented from sierra::nalu::Realm.

Member Data Documentation

std::vector<InputOutputInfo *> sierra::nalu::InputOutputRealm::inputOutputFieldInfo_

Referenced by load(), register_io_fields(), and ~InputOutputRealm().

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Public Attributes

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation