Namespaces
	anonymous_namespace{Hex8FEM.C}

	anonymous_namespace{PromotedElementIO.C}

	anonymous_namespace{TpetraLinearSystem.C}

	Jacobian

	promotion

	utils

Classes
class	ABLForcingAlgorithm
	ABL Forcing Source terms for Momentum and Temperature equations. More...

class	ABLProfileFunction

class	Actuator

class	ActuatorLinePointDrag

class	ActuatorLinePointDragInfo

class	ActuatorLinePointDragPointInfo

class	Algorithm

class	AlgorithmDriver

struct	AlgTraitsHex27

struct	AlgTraitsHex8

struct	AlgTraitsHexGL

struct	AlgTraitsPyr5

struct	AlgTraitsQuad4_2D

struct	AlgTraitsQuad9_2D

struct	AlgTraitsQuadGL

struct	AlgTraitsTet4

struct	AlgTraitsTri3_2D

struct	AlgTraitsWed6

class	AssembleContinuityEdgeOpenSolverAlgorithm

class	AssembleContinuityEdgeSolverAlgorithm

class	AssembleContinuityElemOpenSolverAlgorithm

class	AssembleContinuityElemSolverAlgorithm

class	AssembleContinuityInflowSolverAlgorithm

class	AssembleContinuityNonConformalSolverAlgorithm

class	AssembleCourantReynoldsElemAlgorithm

class	AssembleElemSolverAlgorithm

class	AssembleElemSolverAlgorithmDep

class	AssembleHeatCondIrradWallSolverAlgorithm

class	AssembleHeatCondWallSolverAlgorithm

class	AssembleMeshDisplacementElemSolverAlgorithm

class	AssembleMomentumEdgeABLWallFunctionSolverAlgorithm

class	AssembleMomentumEdgeOpenSolverAlgorithm

class	AssembleMomentumEdgeSolverAlgorithm

class	AssembleMomentumEdgeSymmetrySolverAlgorithm

class	AssembleMomentumEdgeWallFunctionSolverAlgorithm

class	AssembleMomentumElemABLWallFunctionSolverAlgorithm

class	AssembleMomentumElemOpenSolverAlgorithm

class	AssembleMomentumElemSolverAlgorithm

class	AssembleMomentumElemSymmetrySolverAlgorithm

class	AssembleMomentumElemWallFunctionSolverAlgorithm

class	AssembleMomentumNonConformalSolverAlgorithm

class	AssembleNodalGradAlgorithmDriver

class	AssembleNodalGradBoundaryAlgorithm

class	AssembleNodalGradEdgeAlgorithm

class	AssembleNodalGradElemAlgorithm

class	AssembleNodalGradNonConformalAlgorithm

class	AssembleNodalGradUAlgorithmDriver

class	AssembleNodalGradUBoundaryAlgorithm

class	AssembleNodalGradUEdgeAlgorithm

class	AssembleNodalGradUElemAlgorithm

class	AssembleNodalGradUNonConformalAlgorithm

class	AssembleNodeSolverAlgorithm

class	AssembleOversetSolverConstraintAlgorithm

class	AssemblePNGBoundarySolverAlgorithm

class	AssemblePNGElemSolverAlgorithm

class	AssemblePNGNonConformalSolverAlgorithm

class	AssemblePressureForceBCSolverAlgorithm

class	AssembleRadTransEdgeSolverAlgorithm

class	AssembleRadTransEdgeUpwindSolverAlgorithm

class	AssembleRadTransElemSolverAlgorithm

class	AssembleRadTransWallSolverAlgorithm

class	AssembleScalarDiffNonConformalSolverAlgorithm

class	AssembleScalarEdgeDiffSolverAlgorithm

class	AssembleScalarEdgeOpenSolverAlgorithm

class	AssembleScalarEdgeSolverAlgorithm

class	AssembleScalarEigenEdgeSolverAlgorithm

class	AssembleScalarElemDiffSolverAlgorithm

class	AssembleScalarElemOpenSolverAlgorithm

class	AssembleScalarElemSolverAlgorithm

class	AssembleScalarFluxBCSolverAlgorithm

class	AssembleScalarNonConformalSolverAlgorithm

class	AssembleWallHeatTransferAlgorithmDriver

class	AuxFunction

class	AuxFunctionAlgorithm

class	AveragingInfo

class	BoundaryCondition

struct	BoundaryConditionOptions

class	BoundaryConditions

class	BoundaryLayerPerturbationAuxFunction

class	BSpline
	Base class for B-Splines. More...

class	BSpline1D
	Support for B-Spline of a curve. More...

class	BSpline2D

class	BSpline3D

class	BSpline4D

class	BSpline5D

class	ChiConverter
	Calculates reference scalar dissipation rate. More...

class	ClassicPecletFunction

struct	ClipEvent

class	ClipEventSortCriterion

struct	CompareEntityById

struct	compareGaussPoint

class	ComputeABLWallFrictionVelocityAlgorithm

class	ComputeGeometryAlgorithmDriver

class	ComputeGeometryBoundaryAlgorithm

class	ComputeGeometryInteriorAlgorithm

class	ComputeHeatTransferEdgeWallAlgorithm

class	ComputeHeatTransferElemWallAlgorithm

class	ComputeLowReynoldsSDRWallAlgorithm

class	ComputeMdotAlgorithmDriver

class	ComputeMdotEdgeAlgorithm

class	ComputeMdotEdgeOpenAlgorithm

class	ComputeMdotElemAlgorithm

class	ComputeMdotElemOpenAlgorithm

class	ComputeMdotInflowAlgorithm

class	ComputeMdotNonConformalAlgorithm

class	ComputeSSTMaxLengthScaleElemAlgorithm

class	ComputeTurbKineticEnergyWallFunctionAlgorithm

class	ComputeWallFrictionVelocityAlgorithm

class	ComputeWallModelSDRWallAlgorithm

class	ConstantAuxFunction

struct	ConstantInitialConditionData

class	ConstantPropertyEvaluator

class	ContinuityAdvElemKernel
	CMM (BDF2) for continuity equation (pressure DOF) More...

class	ContinuityEquationSystem

class	ContinuityGclNodeSuppAlg

class	ContinuityLowSpeedCompressibleNodeSuppAlg

class	ContinuityMassBackwardEulerNodeSuppAlg

class	ContinuityMassBDF2NodeSuppAlg

class	ContinuityMassElemKernel
	CMM (BDF2/BE) for continuity equation (pressure DOF) More...

class	ContinuityMassElemSuppAlgDep

struct	ContourData

class	ConvectingTaylorVortexPressureAuxFunction

class	ConvectingTaylorVortexPressureGradAuxFunction

class	ConvectingTaylorVortexVelocityAuxFunction

class	Converter
	Provides arbitrary processing of input data before handing off values to a Table for interpolation. More...

class	ConverterFactory
	Simple factory to build an empty Converter of the correct type based on its string name. More...

class	Coord2D
	Helper class to simplify 2D coordinate storage and calculations. More...

struct	Coordinates

class	CopyFieldAlgorithm

class	CoriolisSrc

class	DataProbeInfo

class	DataProbePostProcessing

class	DataProbeSpecInfo

class	DeltaChiConverter
	Calculates reference scalar dissipation rate. More...

class	DeltaGammaConverter
	Calculates reference heat loss parameter. More...

class	DgInfo

class	DirichletBC

class	Edge2DSCS

class	Edge32DSCS

class	EffectiveDiffFluxCoeffAlgorithm

class	EffectiveSSTDiffFluxCoeffAlgorithm

class	ElemDataRequests

class	ElementCondenser

struct	ElementDescription

struct	Emissivity

class	EnthalpyABLSrcNodeSuppAlg

class	EnthalpyConstCpkPropertyEvaluator

class	EnthalpyConstSpecHeatPropertyEvaluator

class	EnthalpyEffectiveDiffFluxCoeffAlgorithm

class	EnthalpyEquationSystem

class	EnthalpyLowSpeedCompressibleNodeSuppAlg

class	EnthalpyPmrSrcNodeSuppAlg

class	EnthalpyPressureWorkNodeSuppAlg

class	EnthalpyPropertyEvaluator

class	EnthalpyTYkPropertyEvaluator

class	EnthalpyViscousWorkNodeSuppAlg

struct	EnvironmentalT

class	EquationSystem
	Base class representation of a PDE. More...

class	EquationSystems
	A collection of Equations to be solved on a Realm. More...

class	ErrorIndicatorAlgorithmDriver

class	FChi
	Class to wrap the F_chi() function with an interface that is compatible with our Functor implementation. More...

class	FGamma
	Class to wrap the F_gamma() function with an interface that is compatible with our Functor implementation. More...

struct	FieldInfo

struct	FieldInfoLess

class	FixPressureAtNodeAlgorithm
	Set the reference pressure in the computational domain for ABL simulations. More...

struct	FixPressureAtNodeInfo
	Input data for fixing pressure during ABL simulations. More...

class	FlowPastCylinderTempAuxFunction

class	FromMesh

class	GammaConverter
	Calculates reference heat loss parameter. More...

class	GenericPropAlgorithm

class	H5IO
	Simple wrapper around the HDF5 library to make usage easier. More...

class	HDF5FilePtr
	Provides a HDF5 formatted file pointer. More...

class	HDF5Table
	Object to manage property evaluation as a function of a set of input chemical state variables. More...

class	HDF5TablePropAlgorithm
	Object to manage property evaluation as a function of a set of input chemical state variables. More...

class	HeatCondEquationSystem

class	HeatCondMassBackwardEulerNodeSuppAlg

class	HeatCondMassBDF2NodeSuppAlg

struct	HeatTransferCoefficient

class	Hex27SCS

class	Hex27SCV

class	Hex8FEM

class	HexahedralP2Element

struct	HexNElementDescription

class	HexSCS

class	HexSCV

class	HigherOrderEdge2DSCS

class	HigherOrderHexSCS

class	HigherOrderHexSCV

class	HigherOrderQuad2DSCS

class	HigherOrderQuad2DSCV

class	HigherOrderQuad3DSCS

class	HStarConverter
	Calculates reference heat loss parameter. More...

class	IdealGasTPPropertyEvaluator

class	IdealGasTPropertyEvaluator

class	IdealGasTYkPropertyEvaluator

class	IdealGasYkPropertyEvaluator

struct	InflowBoundaryConditionData

struct	InflowUserData

class	InitialCondition

class	InitialConditions

class	InputOutputInfo

class	InputOutputRealm

class	InterfaceBalancer

class	InverseDualVolumePropAlgorithm

class	InversePropAlgorithm

struct	Irradiation

class	Kernel
	Base class for computational kernels in Nalu. More...

class	KernelBuilderLog

class	KovasznayPressureAuxFunction

class	KovasznayPressureGradientAuxFunction

class	KovasznayVelocityAuxFunction

class	Lagrange1D

class	LagrangeBasis

class	LimiterErrorIndicatorElemAlgorithm

class	LinearPropAlgorithm

class	LinearRampMeshDisplacementAuxFunction

class	LinearSolver

class	LinearSolvers

class	LinearSystem

class	LinInterp

struct	LinSys

class	LowMachEquationSystem

class	LU
	Supports LU-decompositon for a matrix. More...

struct	MassFraction

class	MassFractionEquationSystem

class	MasterElement

struct	MasterElementRepo

class	MasterElementViews

struct	MasterSlave

class	MaterialProperty

class	MaterialPropertyData

class	MaterialPropertys

class	MeshDisplacementEquationSystem

class	MeshDisplacementMassBackwardEulerNodeSuppAlg

struct	MeshInput

class	MeshMotionInfo

struct	MixtureFraction

class	MixtureFractionEquationSystem

class	MomentumABLForceSrcNodeSuppAlg

class	MomentumActuatorSrcNodeSuppAlg

class	MomentumAdvDiffElemKernel
	Advection diffusion term for momentum equation (velocity DOF) More...

class	MomentumBodyForceSrcNodeSuppAlg

class	MomentumBoussinesqSrcNodeSuppAlg

class	MomentumBuoyancyBoussinesqSrcElemKernel
	CMM buoyancy term for momentum equation (velocity DOF) More...

class	MomentumBuoyancySrcElemKernel
	CMM buoyancy term for momentum equation (velocity DOF) More...

class	MomentumBuoyancySrcElemSuppAlgDep

class	MomentumBuoyancySrcNodeSuppAlg

class	MomentumCoriolisSrcElemKernel

class	MomentumCoriolisSrcNodeSuppAlg

class	MomentumEquationSystem

class	MomentumGclSrcNodeSuppAlg

class	MomentumMassBackwardEulerNodeSuppAlg

class	MomentumMassBDF2NodeSuppAlg

class	MomentumMassElemKernel
	CMM (BDF2/BE) for momentum equation (velocity DOF) More...

class	MomentumMassElemSuppAlgDep

class	MomentumNSOElemKernel
	NSO for momentum equation. More...

class	MomentumNSOElemSuppAlgDep

class	MomentumNSOGradElemSuppAlg

class	MomentumNSOKeElemKernel
	NSO for momentum equation. More...

class	MomentumNSOKeElemSuppAlgDep

class	MomentumNSOSijElemKernel
	NSO for momentum equation. More...

class	NaluEmptyStreamBuffer

class	NaluEnv

class	NaluParsingHelper

class	NameConverter
	Does a whole bunch of nothing other than renaming variables. More...

class	NeutralABLProfileFunction

struct	nodalGradientElem

struct	NonConformalBoundaryConditionData

class	NonConformalInfo

class	NonConformalManager

struct	NonConformalUserData

struct	NormalHeatFlux

struct	OpenBoundaryConditionData

struct	OpenUserData

class	OutputInfo

struct	OversetBoundaryConditionData

struct	OversetFieldData

class	OversetInfo

class	OversetManager

struct	OversetUserData

class	PecletFunction

struct	PeriodicBoundaryConditionData

class	PeriodicManager

struct	PeriodicUserData

class	PolynomialPropertyEvaluator

class	PostProcessingData

class	PostProcessingInfo

struct	Pressure

class	ProjectedNodalGradientEquationSystem

class	PromotedElementIO

class	PropertyEvaluator

class	PstabErrorIndicatorEdgeAlgorithm

class	PstabErrorIndicatorElemAlgorithm

class	PyrSCS

class	PyrSCV

class	Quad2DSCS

class	Quad2DSCV

class	Quad3DSCS

class	Quad92DSCS

class	Quad92DSCV

class	Quad93DSCS

struct	QuadNElementDescription

class	QuadrilateralP2Element

class	RadiativeTransportEquationSystem

class	RadTransBlackBodyNodeSuppAlg

class	RadTransFemElemSuppAlg

class	RadTransIsoScatteringNodeSuppAlg

class	RadTransSupgElemSuppAlg

class	RayleighTaylorMixFracAuxFunction

class	Realm

class	Realms

class	ReferencePropertyData

struct	ReferenceTemperature

struct	RobinCouplingParameter

struct	RoughnessHeight

class	ScalarAdvDiffElemKernel
	CVFEM scalar advection/diffusion kernel. More...

class	ScalarDiffElemKernel
	CVFEM scalar advection/diffusion kernel. More...

class	ScalarDiffFemKernel
	CVFEM scalar advection/diffusion kernel. More...

class	ScalarGclNodeSuppAlg

class	ScalarMassBackwardEulerNodeSuppAlg

class	ScalarMassBDF2NodeSuppAlg

class	ScalarMassElemKernel
	CMM (BDF2/BE) for scalar equation. More...

class	ScalarMassElemSuppAlgDep

class	ScalarNSOElemKernel
	NSO for momentum equation. More...

class	ScalarNSOElemSuppAlgDep

class	ScalarNSOKeElemSuppAlg

class	ScalarUpwAdvDiffElemKernel
	CVFEM scalar upwind advection/diffusion kernel. More...

class	ScratchViews

class	SGLQuadratureOps

class	ShearStressTransportEquationSystem

class	SimpleErrorIndicatorElemAlgorithm

class	SimpleErrorIndicatorScalarElemAlgorithm

class	Simulation

class	SinMeshDisplacementAuxFunction

class	SinProfileChannelFlowVelocityAuxFunction

class	SolutionNormPostProcessing

class	SolutionOptions

class	SolverAlgorithm

class	SolverAlgorithmDriver

struct	sortIntLowHigh

struct	SpecDissRate

class	SpecificDissipationRateEquationSystem

class	SpecificDissipationRateSSTNodeSourceSuppAlg

class	SpecificHeatConstCpkPropertyEvaluator

class	SpecificHeatPropertyEvaluator

class	SpecificHeatTYkPropertyEvaluator

class	StableABLProfileFunction

class	StateTable

class	SteadyTaylorVortexContinuitySrcElemSuppAlg

class	SteadyTaylorVortexGradPressureAuxFunction

class	SteadyTaylorVortexMomentumSrcElemSuppAlg

class	SteadyTaylorVortexMomentumSrcNodeSuppAlg

class	SteadyTaylorVortexPressureAuxFunction

class	SteadyTaylorVortexVelocityAuxFunction

class	SteadyThermal3dContactAuxFunction

class	SteadyThermal3dContactDtDxAuxFunction

class	SteadyThermal3dContactSrcElemKernel

class	SteadyThermal3dContactSrcElemSuppAlgDep

class	SteadyThermalContact3DSrcNodeSuppAlg

class	SteadyThermalContactAuxFunction

class	SteadyThermalContactSrcElemSuppAlg

class	SteadyThermalContactSrcNodeSuppAlg

class	SupplementalAlgorithm

class	SurfaceForceAndMomentAlgorithm

class	SurfaceForceAndMomentAlgorithmDriver

class	SurfaceForceAndMomentWallFunctionAlgorithm

class	SutherlandsPropertyEvaluator

class	SutherlandsYkPropertyEvaluator

class	SutherlandsYkTrefPropertyEvaluator

struct	SymmetryBoundaryConditionData

struct	SymmetryUserData

class	TanhFunction

class	TaylorGreenPressureAuxFunction

class	TaylorGreenVelocityAuxFunction

struct	Temperature

class	TemperaturePropAlgorithm

class	TensorProductQuadratureRule

class	TetSCS

class	TetSCV

class	ThermalConductivityFromPrandtlPropAlgorithm

class	TimeIntegrator

class	ToMesh

class	TornadoAuxFunction

class	TpetraLinearSolver

class	TpetraLinearSolverConfig

class	TpetraLinearSystem

class	Transfer

class	Transfers

struct	Transmissivity

class	Tri2DSCS

class	Tri2DSCV

class	Tri3DSCS

struct	TurbKinEnergy

class	TurbKineticEnergyEquationSystem

class	TurbKineticEnergyKsgsBuoyantElemSuppAlg

class	TurbKineticEnergyKsgsNodeSourceSuppAlg

class	TurbKineticEnergyKsgsSrcElemKernel
	Add Ksgs source term for kernel-based algorithm approach. More...

class	TurbKineticEnergyRodiNodeSourceSuppAlg

class	TurbKineticEnergySSTDESNodeSourceSuppAlg

class	TurbKineticEnergySSTNodeSourceSuppAlg

class	TurbulenceAveragingPostProcessing

class	TurbViscKsgsAlgorithm

class	TurbViscSmagorinskyAlgorithm

class	TurbViscSSTAlgorithm

class	TurbViscWaleAlgorithm

class	UnitTests

class	UnstableABLProfileFunction

class	UpdateOversetFringeAlgorithmDriver

struct	UserData

struct	UserFunctionInitialConditionData

class	VariableDensityContinuitySrcElemSuppAlg

class	VariableDensityContinuitySrcNodeSuppAlg

class	VariableDensityMixFracAuxFunction

class	VariableDensityMixFracSrcElemSuppAlg

class	VariableDensityMixFracSrcNodeSuppAlg

class	VariableDensityMomentumSrcElemSuppAlg

class	VariableDensityMomentumSrcNodeSuppAlg

class	VariableDensityNonIsoContinuitySrcNodeSuppAlg

class	VariableDensityNonIsoEnthalpySrcNodeSuppAlg

class	VariableDensityNonIsoMomentumSrcNodeSuppAlg

class	VariableDensityNonIsoTemperatureAuxFunction

class	VariableDensityPressureAuxFunction

class	VariableDensityVelocityAuxFunction

struct	Velocity

struct	ViewHolder

struct	ViewT

struct	WallBoundaryConditionData

struct	WallUserData

class	WaterDensityTPropertyEvaluator

class	WaterEnthalpyTPropertyEvaluator

class	WaterSpecHeatTPropertyEvaluator

class	WaterThermalCondTPropertyEvaluator

class	WaterViscosityTPropertyEvaluator

class	WedSCS

class	WedSCV

class	WindEnergyAuxFunction

class	WindEnergyTaylorVortexAuxFunction

class	WindEnergyTaylorVortexPressureAuxFunction

class	WindEnergyTaylorVortexPressureGradAuxFunction

Typedefs
typedef stk::search::IdentProc< uint64_t, int >	theKey

typedef stk::search::Point< double >	Point

typedef stk::search::Sphere< double >	Sphere

typedef stk::search::Box< double >	Box

typedef std::pair< Sphere, theKey >	boundingSphere

typedef std::pair< Box, theKey >	boundingElementBox

typedef std::vector< BoundaryCondition * >	BoundaryConditionVector

typedef std::set< FieldInfo, FieldInfoLess >	FieldSet

using	ordinal_type = int

typedef std::vector< EquationSystem * >	EquationSystemVector

typedef stk::mesh::Field< double >	ScalarFieldType

typedef stk::mesh::Field< stk::mesh::EntityId >	GlobalIdFieldType

typedef stk::mesh::Field< int >	ScalarIntFieldType

typedef stk::mesh::Field< double, stk::mesh::Cartesian >	VectorFieldType

typedef stk::mesh::Field< double, stk::mesh::SimpleArrayTag >	GenericFieldType

typedef unsigned	LocalId

typedef stk::mesh::Field< LocalId >	LocalIdFieldType

typedef std::vector< InitialCondition * >	InitialConditionVector

using	HostSpace = Kokkos::HostSpace

using	DeviceSpace = Kokkos::DefaultExecutionSpace

using	DeviceShmem = DeviceSpace::scratch_memory_space

using	DynamicScheduleType = Kokkos::Schedule< Kokkos::Dynamic >

using	TeamHandleType = Kokkos::TeamPolicy< DeviceSpace, DynamicScheduleType >::member_type

template<typename T >
using	SharedMemView = Kokkos::View< T, Kokkos::LayoutRight, DeviceShmem, Kokkos::MemoryUnmanaged >

using	DeviceTeamPolicy = Kokkos::TeamPolicy< DeviceSpace >

using	DeviceTeam = DeviceTeamPolicy::member_type

typedef std::vector< MaterialProperty * >	MaterialPropertyVector

typedef std::pair< Point, theKey >	boundingPoint

typedef stk::search::IdentProc< stk::mesh::EntityKey, int >	theEntityKey

typedef std::pair< Sphere, theEntityKey >	sphereBoundingBox

typedef std::vector< Realm * >	RealmVector

typedef stk::simd::Double	SimdDouble

typedef SimdDouble	DoubleType

template<typename T >
using	AlignedVector = std::vector< T, non_std::AlignedAllocator< T, 64 >>

using	ScalarAlignedVector = AlignedVector< DoubleType >

typedef std::set< ClipEvent, ClipEventSortCriterion< ClipEvent > >	ClipEventLog

typedef boost::unordered_map< stk::mesh::EntityId, size_t >	MyLIDMapType

typedef std::pair< stk::mesh::Entity, stk::mesh::Entity >	Connection

typedef Kokkos::UnorderedMap< Connection, void >	ConnectionSetKK

typedef std::vector< Connection >	ConnectionVec

Enumerations
enum	ELEM_DATA_NEEDED { SCS_AREAV = 0, SCS_GRAD_OP, SCS_SHIFTED_GRAD_OP, SCS_GIJ, SCV_VOLUME, FEM_GRAD_OP, FEM_SHIFTED_GRAD_OP }

enum	COORDS_TYPES { CURRENT_COORDINATES = 0, MODEL_COORDINATES, MAX_COORDS_TYPES }

enum	AlgorithmType { INTERIOR = 0, INFLOW = 1, WALL = 2, OPEN = 3, MASS = 4, SRC = 5, SYMMETRY = 6, WALL_HF = 7, WALL_CHT = 8, WALL_RAD = 9, NON_CONFORMAL = 10, ELEM_SOURCE = 11, OVERSET = 12, WALL_ABL = 13, REF_PRESSURE = 14 }

enum	BoundaryConditionType { INFLOW_BC = 1, OPEN_BC = 2, WALL_BC = 3, SYMMETRY_BC = 4, PERIODIC_BC = 5, NON_CONFORMAL_BC = 6, OVERSET_BC = 7 }

enum	EquationType { EQ_MOMENTUM = 0, EQ_CONTINUITY = 1, EQ_MIXTURE_FRACTION = 2, EQ_TURBULENT_KE = 3, EQ_TEMPERATURE = 4, EQ_INTENSITY = 5, EQ_ENTHALPY = 6, EQ_MESH_DISPLACEMENT = 7, EQ_SPEC_DISS_RATE = 8, EQ_MASS_FRACTION = 9, EQ_PNG = 10, EQ_PNG_P = 11, EQ_PNG_Z = 12, EQ_PNG_H = 13, EQ_PNG_U = 14, EQ_PNG_TKE = 15, EquationSystemType_END }

enum	UserDataType { CONSTANT_UD = 0, FUNCTION_UD = 1, USER_SUB_UD = 2, UserDataType_END }

enum	PropertyIdentifier { DENSITY_ID = 0, VISCOSITY_ID = 1, SPEC_HEAT_ID = 2, THERMAL_COND_ID = 3, ABSORBTION_COEFF_ID = 4, ENTHALPY_ID = 5, LAME_MU_ID = 6, LAME_LAMBDA_ID = 7, SCATTERING_COEFF_ID = 8, PropertyIdentifier_END }

enum	MaterialPropertyType { CONSTANT_MAT = 0, MIXFRAC_MAT = 1, POLYNOMIAL_MAT = 2, IDEAL_GAS_T_MAT = 3, GEOMETRIC_MAT = 4, IDEAL_GAS_T_P_MAT = 5, HDF5_TABLE_MAT = 6, IDEAL_GAS_YK_MAT = 7, GENERIC = 8, MaterialPropertyType_END }

enum	NaluState { NALU_STATE_N = 0, NALU_STATE_NM1 = 1 }

enum	TurbulenceModel { LAMINAR = 0, KSGS = 1, SMAGORINSKY = 2, WALE = 3, SST = 4, SST_DES = 5, TurbulenceModel_END }

enum	TurbulenceModelConstant { TM_cMu = 0, TM_kappa = 1, TM_cDESke = 2, TM_cDESkw = 3, TM_tkeProdLimitRatio = 4, TM_cmuEps = 5, TM_cEps = 6, TM_betaStar = 7, TM_aOne = 8, TM_betaOne = 9, TM_betaTwo = 10, TM_gammaOne = 11, TM_gammaTwo = 12, TM_sigmaKOne = 13, TM_sigmaKTwo = 14, TM_sigmaWOne = 15, TM_sigmaWTwo = 16, TM_cmuCs = 17, TM_Cw = 18, TM_CbTwo = 19, TM_SDRWallFactor = 20, TM_END = 21 }

enum	ActuatorType { ActLinePointDrag = 0, ActLineFAST = 1, ActuatorType_END }

enum	PetraType { PT_TPETRA, PT_END }

enum	ErrorIndicatorType { EIT_NONE = 0, EIT_PSTAB = 1 << 1, EIT_LIMITER = 1 << 2, EIT_SIMPLE_BASE = 1 << 3, EIT_SIMPLE_VORTICITY = EIT_SIMPLE_BASE + (1 << 4), EIT_SIMPLE_VORTICITY_DX = EIT_SIMPLE_BASE + (1 << 5), EIT_SIMPLE_DUDX2 = EIT_SIMPLE_BASE + (1 << 6) }

Functions
	INSTANTIATE_KERNEL (ContinuityAdvElemKernel)

	INSTANTIATE_KERNEL (ContinuityMassElemKernel)

template<typename Scalar >
void	mat_chunk (const Scalar mat, int nrows, Scalar chunk, int istart, int jstart, int iend, int jend)

int	poly_order_from_super_topology (int dimension, stk::topology superTopo)

bool	part_vector_is_valid_and_nonempty (const stk::mesh::PartVector &parts)

bool	check_part_topo (const stk::mesh::Part &part)

bool	check_parts_for_promotion (const stk::mesh::PartVector &parts)

std::string	super_element_suffix ()

std::string	super_element_part_name (std::string base_name)

std::string	super_subset_part_name (const std::string &base_name)

std::string	super_subset_part_name (const std::string &base_name, int numElemNodes, int numSideNodes)

std::string	base_element_part_name (std::string super_name)

stk::mesh::Part *	super_elem_part (const stk::mesh::Part &part)

stk::mesh::Part *	super_subset_part (const stk::mesh::Part &part, int numElemNodes, int numSideNodes)

stk::mesh::Part *	super_subset_part (const stk::mesh::Part &part)

stk::mesh::Part *	base_elem_part_from_super_elem_part (const stk::mesh::Part &super_elem_part)

stk::mesh::Part *	super_elem_part (const stk::mesh::Part *part)

void	transform_to_super_elem_part_vector (stk::mesh::PartVector &parts)

bool	is_super (const stk::mesh::Part *p)

bool	is_side (const stk::mesh::Part *p)

bool	is_super_side (const stk::mesh::Part *p)

stk::mesh::PartVector	base_ranked_parts (const stk::mesh::PartVector &parts, stk::topology::rank_t rank, bool with_subsets)

stk::mesh::PartVector	base_elem_parts (const stk::mesh::PartVector &parts)

stk::mesh::PartVector	base_edge_parts (const stk::mesh::PartVector &parts)

stk::mesh::PartVector	base_face_parts (const stk::mesh::PartVector &parts)

stk::mesh::PartVector	only_super_parts (const stk::mesh::PartVector &parts)

stk::mesh::PartVector	only_super_elem_parts (const stk::mesh::PartVector &parts)

stk::mesh::PartVector	only_super_side_parts (const stk::mesh::PartVector &parts)

stk::mesh::PartVector	super_elem_part_vector (const stk::mesh::PartVector &parts)

size_t	count_entities (const stk::mesh::BucketVector &buckets)

std::pair< Teuchos::SerialDenseVector< int, double >, Teuchos::SerialDenseVector< int, double > >	jacobi_recursion_coefficients (const double alpha, const double beta, const int order)

std::pair< std::vector< double >, std::vector< double > >	gauss_legendre_rule (int order)

std::pair< Teuchos::SerialDenseVector< int, double >, Teuchos::SerialDenseVector< int, double > >	coefficients_for_lobatto (int order, double xl1, double xl2)

std::pair< std::vector< double >, std::vector< double > >	gauss_lobatto_legendre_rule (int order, double xleft, double xright)

Teuchos::SerialDenseVector< int, double >	subinterval_weights_for_fixed_abscissae (std::vector< double > fixedAbscissae, double xleft, double xright)

std::pair< std::vector< double >, std::vector< double > >	SGL_quadrature_rule (int order, std::vector< double > scsEndLocations)

std::vector< double >	pad_end_points (std::vector< double > x, double xleft, double xright)

void	field_axpby (const stk::mesh::MetaData &metaData, const stk::mesh::BulkData &bulkData, const double alpha, const stk::mesh::FieldBase &xField, const double beta, const stk::mesh::FieldBase &yField, const bool auraIsActive, const stk::topology::rank_t entityRankValue)

void	field_fill (const stk::mesh::MetaData &metaData, const stk::mesh::BulkData &bulkData, const double alpha, const stk::mesh::FieldBase &xField, const bool auraIsActive, const stk::topology::rank_t entityRankValue)

void	field_scale (const stk::mesh::MetaData &metaData, const stk::mesh::BulkData &bulkData, const double alpha, const stk::mesh::FieldBase &xField, const bool auraIsActive, const stk::topology::rank_t entityRankValue)

void	field_copy (const stk::mesh::MetaData &metaData, const stk::mesh::BulkData &bulkData, const stk::mesh::FieldBase &xField, const stk::mesh::FieldBase &yField, const bool auraIsActive, const stk::topology::rank_t entityRankValue)

void	field_index_copy (const stk::mesh::MetaData &metaData, const stk::mesh::BulkData &bulkData, const stk::mesh::FieldBase &xField, const int xFieldIndex, const stk::mesh::FieldBase &yField, const int yFieldIndex, const bool auraIsActive, const stk::topology::rank_t entityRankValue)

double	dot5 (const double u, const double v)

std::unique_ptr< MasterElement >	create_surface_master_element (stk::topology topo)

std::unique_ptr< MasterElement >	create_volume_master_element (stk::topology topo)

std::unique_ptr< MasterElement >	create_surface_master_element (stk::topology topo, int dimension, std::string quadType)

std::unique_ptr< MasterElement >	create_volume_master_element (stk::topology topo, int dimension, std::string quadType)

double	parametric_distance_hex (const double *x)

double	parametric_distance_quad (const double *x)

bool	isoparameteric_coordinates_for_point_3d (sierra::nalu::LagrangeBasis &basis, const double POINTER_RESTRICT elemNodalCoords, const double POINTER_RESTRICT pointCoord, double *POINTER_RESTRICT isoParCoord, std::array< double, 3 > initialGuess, int maxIter, double tol, double deltaLimit)

bool	isoparameteric_coordinates_for_point_2d (sierra::nalu::LagrangeBasis &basis, const double POINTER_RESTRICT elemNodalCoords, const double POINTER_RESTRICT pointCoord, double *POINTER_RESTRICT isoParCoord, std::array< double, 2 > initialGuess, int maxIter, double tol, double deltaLimit)

	INSTANTIATE_KERNEL (MomentumAdvDiffElemKernel)

	INSTANTIATE_KERNEL (MomentumBuoyancyBoussinesqSrcElemKernel)

	INSTANTIATE_KERNEL (MomentumBuoyancySrcElemKernel)

	INSTANTIATE_KERNEL (MomentumCoriolisSrcElemKernel)

	INSTANTIATE_KERNEL (MomentumMassElemKernel)

const YAML::Node	expect_type (const YAML::Node &node, const std::string &key, YAML::NodeType::value type, bool optional=false)
	these can be used to check and ensure a type of yaml node is as expected More...

const YAML::Node	expect_null (const YAML::Node &node, const std::string &key, bool optional)

const YAML::Node	expect_scalar (const YAML::Node &node, const std::string &key, bool optional)

const YAML::Node	expect_sequence (const YAML::Node &node, const std::string &key, bool optional)

const YAML::Node	expect_map (const YAML::Node &node, const std::string &key, bool optional)

void	operator>> (const YAML::Node &node, WallBoundaryConditionData &wallBC)

void	operator>> (const YAML::Node &node, InflowBoundaryConditionData &inflowBC)

void	operator>> (const YAML::Node &node, OpenBoundaryConditionData &openBC)

void	operator>> (const YAML::Node &node, OversetBoundaryConditionData &oversetBC)

void	operator>> (const YAML::Node &node, SymmetryBoundaryConditionData &symmetryBC)

void	operator>> (const YAML::Node &node, PeriodicBoundaryConditionData &periodicBC)

void	operator>> (const YAML::Node &node, NonConformalBoundaryConditionData &nonConformalBC)

void	operator>> (const YAML::Node &node, UserFunctionInitialConditionData &fcnIC)

void	operator>> (const YAML::Node &node, ConstantInitialConditionData &constIC)

void	operator>> (const YAML::Node &node, std::map< std::string, bool > &mapName)

void	operator>> (const YAML::Node &node, std::map< std::string, double > &mapName)

void	operator>> (const YAML::Node &node, std::map< std::string, std::string > &mapName)

void	operator>> (const YAML::Node &node, std::map< std::string, std::vector< std::string > > &mapName)

void	operator>> (const YAML::Node &node, std::map< std::string, std::vector< double > > &mapName)

bool	case_insensitive_compare (std::string s1, std::string s2)

void	add_downward_relations (const stk::mesh::BulkData &bulk, std::vector< stk::mesh::EntityKey > &entityKeys)

void	keep_elems_not_already_ghosted (const stk::mesh::BulkData &bulk, const stk::mesh::EntityProcVec &alreadyGhosted, stk::mesh::EntityProcVec &elemsToGhost)

void	fill_send_ghosts_to_remove_from_ghosting (const stk::mesh::EntityProcVec &curSendGhosts, const stk::mesh::EntityProcVec &intersection, stk::mesh::EntityProcVec &sendGhostsToRemove)

void	communicate_to_fill_recv_ghosts_to_remove (const stk::mesh::BulkData &bulk, const stk::mesh::EntityProcVec &sendGhostsToRemove, std::vector< stk::mesh::EntityKey > &recvGhostsToRemove)

void	keep_only_elems (const stk::mesh::BulkData &bulk, stk::mesh::EntityProcVec &entityProcs)

	INSTANTIATE_KERNEL (MomentumNSOElemKernel)

	INSTANTIATE_KERNEL (MomentumNSOKeElemKernel)

	INSTANTIATE_KERNEL (MomentumNSOSijElemKernel)

	INSTANTIATE_KERNEL (ScalarNSOElemKernel)

	INSTANTIATE_KERNEL (ScalarAdvDiffElemKernel)

	INSTANTIATE_KERNEL (ScalarDiffElemKernel)

	INSTANTIATE_KERNEL (ScalarDiffFemKernel)

	INSTANTIATE_KERNEL (ScalarMassElemKernel)

	INSTANTIATE_KERNEL (ScalarUpwAdvDiffElemKernel)

void	gather_elem_node_field (const stk::mesh::FieldBase &field, int numNodes, const stk::mesh::Entity elemNodes, SharedMemView< double > &shmemView)

void	gather_elem_node_tensor_field (const stk::mesh::FieldBase &field, int numNodes, int tensorDim1, int tensorDim2, const stk::mesh::Entity elemNodes, SharedMemView< double ** > &shmemView)

void	gather_elem_tensor_field (const stk::mesh::FieldBase &field, stk::mesh::Entity elem, int tensorDim1, int tensorDim2, SharedMemView< double ** > &shmemView)

void	gather_elem_node_field_3D (const stk::mesh::FieldBase &field, int numNodes, const stk::mesh::Entity elemNodes, SharedMemView< double * > &shmemView)

void	gather_elem_node_field (const stk::mesh::FieldBase &field, int numNodes, int scalarsPerNode, const stk::mesh::Entity elemNodes, SharedMemView< double * > &shmemView)

int	get_num_scalars_pre_req_data (ElemDataRequests &dataNeededBySuppAlgs, int nDim)

void	fill_pre_req_data (ElemDataRequests &dataNeeded, const stk::mesh::BulkData &bulkData, stk::topology topo, stk::mesh::Entity elem, ScratchViews< double > &prereqData, bool fillMEViews)

void	fill_master_element_views (ElemDataRequests &dataNeeded, const stk::mesh::BulkData &bulkData, stk::topology topo, stk::mesh::Entity elem, ScratchViews< DoubleType > &prereqData)

void	basis_funs (const int i, const int p, const double u, const vector< double > &U, vector< double > &N)

int	find_indx (const int n, const int p, const double u, const vector< double > &U)

double	get_uk (const double indepVar, const double maxIndepVarVal, const double minIndepVarVal, const bool clipExtrema)

void	set_uk (const vector< double > &indepVars, vector< double > &uk, const double maxIndepVarVal, const double minIndepVarVal)

int	set_knot_vector (const vector< double > &uk, const int order, vector< double > &knots)

double	errorf (const double x)
	This file contains generic mathematical functions that are needed at run-time by our Converter classes. More...

double	errorfc (const double x)
	Compute the complementary error function using series solutions. More...

double	inv_errorf (const double x)
	Compute the inverse error function using Newton's method. More...

double	F_chi (const double Z)
	Compute the quantity: More...

double	F_gamma (const std::vector< double > &Zpoint, std::vector< std::vector< double > > Z_st, std::vector< double > gamma_st)
	Compute the value of F_gamma (not Gamma itself) for one or two mixture fractions. More...

	INSTANTIATE_KERNEL (TurbKineticEnergyKsgsSrcElemKernel)

	INSTANTIATE_KERNEL (SteadyThermal3dContactSrcElemKernel)

template<int p>
constexpr int	nGL ()

template<class LOOP_BODY >
void	bucket_loop (const stk::mesh::BucketVector &buckets, LOOP_BODY inner_loop_body)

template<typename DTYPE >
void	interleave_3D (SharedMemView< DTYPE * > &dview, const SharedMemView< double * > &sview, int simdIndex)

template<typename DTYPE >
void	interleave_2D (SharedMemView< DTYPE > &dview, const SharedMemView< double > &sview, int simdIndex)

template<typename DTYPE >
void	interleave_1D (SharedMemView< DTYPE * > &dview, const SharedMemView< double * > &sview, int simdIndex)

template<typename DTYPE >
void	interleave_1D (SharedMemView< DTYPE * > &dview, const double *sviews[], int simdElems)

template<typename DTYPE >
void	interleave_2D (SharedMemView< DTYPE ** > &dview, const double *sviews[], int simdElems)

template<typename DTYPE >
void	interleave_3D (SharedMemView< DTYPE *** > &dview, const double *sviews[], int simdElems)

void	interleave_1D (ViewHolder dest, const ViewHolder sviews[], int simdElems)

void	interleave_2D (ViewHolder dest, const ViewHolder sviews[], int simdElems)

void	interleave_3D (ViewHolder dest, const ViewHolder sviews[], int simdElems)

void	interleave_me_views (MasterElementViews< DoubleType > &dest, const MasterElementViews< double > &src, int simdIndex)

void	copy_and_interleave (const std::vector< ScratchViews< double > * > &data, int simdElems, ScratchViews< DoubleType > &simdData, bool copyMEViews=true)

void	extract_vector_lane (const SharedMemView< DoubleType * > &simdrhs, int simdIndex, SharedMemView< double * > &rhs)

void	extract_vector_lane (const SharedMemView< DoubleType > &simdlhs, int simdIndex, SharedMemView< double > &lhs)

stk::mesh::PartVector	append_super_elems_to_part_vector (stk::mesh::PartVector parts)

template<typename AlgTraits , typename LambdaFunction , typename ViewType >
void	get_scv_shape_fn_data (LambdaFunction lambdaFunction, ViewType &shape_fn_view)

template<typename AlgTraits , typename LambdaFunction , typename ViewType >
void	get_scs_shape_fn_data (LambdaFunction lambdaFunction, ViewType &shape_fn_view)

template<template< typename > class T, int order, typename... Args>
Kernel *	build_ho_kernel (int dimension, Args &&...args)

template<template< typename > class T, typename... Args>
Kernel *	build_topo_kernel (int dimension, stk::topology topo, Args &&...args)

template<template< typename > class T, typename... Args>
bool	build_topo_kernel_if_requested (stk::topology topo, EquationSystem &eqSys, std::vector< Kernel * > &kernelVec, std::string name, Args &&...args)

std::pair< AssembleElemSolverAlgorithm *, bool >	build_or_add_part_to_solver_alg (EquationSystem &eqSys, stk::mesh::Part &part, std::map< std::string, SolverAlgorithm * > &solverAlgs)

DeviceTeamPolicy	get_team_policy (const size_t sz, const size_t bytes_per_team, const size_t bytes_per_thread)

SharedMemView< int * >	get_int_shmem_view_1D (const TeamHandleType &team, size_t len)

SharedMemView< stk::mesh::Entity * >	get_entity_shmem_view_1D (const TeamHandleType &team, size_t len)

template<typename T >
SharedMemView< T * >	get_shmem_view_1D (const TeamHandleType &team, size_t len)

template<typename T >
SharedMemView< T ** >	get_shmem_view_2D (const TeamHandleType &team, size_t len1, size_t len2)

template<typename T >
SharedMemView< T *** >	get_shmem_view_3D (const TeamHandleType &team, size_t len1, size_t len2, size_t len3)

template<typename SizeType , class Function >
void	kokkos_parallel_for (const std::string &debuggingName, SizeType n, Function loop_body)

template<typename SizeType , class Function , typename ReduceType >
void	kokkos_parallel_reduce (SizeType n, Function loop_body, ReduceType &reduce, const std::string &debuggingName)

template<typename ViewType >
void	quad_area_by_triangulation (int ics, const typename ViewType::value_type areacoords[4][3], const ViewType &area)

template<typename RealType >
RealType	hex_volume_grandy (RealType scvcoords[8][3])

template<typename CoordViewType >
void	subdivide_hex_8 (CoordViewType coords, typename CoordViewType::value_type coordv[27][3])

template<typename AlgTraits , typename GradViewType , typename CoordViewType , typename OutputViewType >
void	generic_grad_op_3d (GradViewType referenceGradWeights, CoordViewType coords, OutputViewType weights)

template<typename AlgTraits , typename GradViewType , typename CoordViewType , typename OutputViewType >
void	generic_gij_3d (GradViewType referenceGradWeights, CoordViewType coords, OutputViewType gup, OutputViewType glo)

template<typename AlgTraits , typename GradViewType , typename CoordViewType , typename OutputViewType >
void	generic_determinant_3d (GradViewType referenceGradWeights, CoordViewType coords, OutputViewType detj)

constexpr double	tiny_positive_value ()

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION ScalarType	vecnorm_sq2 (const ScalarType *x)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION ScalarType	vecnorm_sq3 (const ScalarType *x)

template<typename ScalarType >
ScalarType	ddot (const ScalarType u, const ScalarType v, int n)

template<typename ScalarType >
void	cross3 (const ScalarType u, const ScalarType v, ScalarType *cross)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION ScalarType	determinant22 (const ScalarType *mat)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION ScalarType	determinant33 (const ScalarType *mat)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	adjugate_matrix33 (const ScalarType jact[3][3], ScalarType adjJac[3][3])

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	invert_matrix33 (const ScalarType A[3][3], ScalarType Ainv[3][3])

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	invert_matrix33 (const ScalarType POINTER_RESTRICT A, ScalarType POINTER_RESTRICT Ainv)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	solve22 (const ScalarType POINTER_RESTRICT A, const ScalarType POINTER_RESTRICT b, ScalarType *POINTER_RESTRICT x)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	solve33 (const ScalarType POINTER_RESTRICT A, const ScalarType POINTER_RESTRICT b, ScalarType *POINTER_RESTRICT x)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	matvec22 (const ScalarType A, const ScalarType x, ScalarType *b)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	mxm22 (const ScalarType A, const ScalarType B, ScalarType *C)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	mxm33 (const ScalarType A, const ScalarType B, ScalarType *C)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	matvec33 (const ScalarType A, const ScalarType x, ScalarType *b)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	transpose22 (const ScalarType A, ScalarType At)

template<typename ScalarType >
KOKKOS_FORCEINLINE_FUNCTION void	transpose33 (const ScalarType A, ScalarType At)

template<typename T , typename... Args>
std::unique_ptr< T >	make_unique (Args &&...args)

template<typename T >
void	get_if_present (const YAML::Node &node, const std::string &key, T &result, const T &default_if_not_present=T())
	Set. More...

template<typename T >
void	get_if_present_no_default (const YAML::Node &node, const std::string &key, T &result)
	this version doesn't change More...

template<typename T >
void	get_required (const YAML::Node &node, const std::string &key, T &result)
	this version requires the More...

template<typename T = double>
int	get_num_bytes_pre_req_data (ElemDataRequests &dataNeededBySuppAlgs, int nDim)

double	F_gamma (const double Z, const double Z_st)
	Compute the quantity F_gamma (and not Gamma itself) More...

template<typename T1 , typename T2 >
void	copy_kokkos_unordered_map (const Kokkos::UnorderedMap< T1, T2 > &src, Kokkos::UnorderedMap< T1, T2 > &dest)

Variables
static const std::string	CoordinatesTypeNames []

static const std::string	EquationTypeMap []

static const std::string	PropertyIdentifierNames []

static const std::string	TurbulenceModelNames []

static const std::string	TurbulenceModelConstantNames []

static std::map< std::string, ActuatorType >	ActuatorTypeMap = { {"ActLinePointDrag",ActuatorType::ActLinePointDrag}, {"ActLineFAST",ActuatorType::ActLineFAST}}

Typedef Documentation

template<typename T >

using sierra::nalu::AlignedVector = typedef std::vector<T, non_std::AlignedAllocator<T, 64>>

typedef std::vector<BoundaryCondition *> sierra::nalu::BoundaryConditionVector

typedef std::pair< Box, theKey > sierra::nalu::boundingElementBox

typedef std::pair<Point,theKey> sierra::nalu::boundingPoint

typedef std::pair<Sphere,theKey> sierra::nalu::boundingSphere

typedef stk::search::Box< double > sierra::nalu::Box

typedef std::set<ClipEvent, ClipEventSortCriterion<ClipEvent> > sierra::nalu::ClipEventLog

typedef std::pair<stk::mesh::Entity, stk::mesh::Entity> sierra::nalu::Connection

typedef Kokkos::UnorderedMap<Connection,void> sierra::nalu::ConnectionSetKK

typedef std::vector< Connection > sierra::nalu::ConnectionVec

using sierra::nalu::DeviceShmem = typedef DeviceSpace::scratch_memory_space

using sierra::nalu::DeviceSpace = typedef Kokkos::DefaultExecutionSpace

using sierra::nalu::DeviceTeam = typedef DeviceTeamPolicy::member_type

using sierra::nalu::DeviceTeamPolicy = typedef Kokkos::TeamPolicy<DeviceSpace>

typedef SimdDouble sierra::nalu::DoubleType

using sierra::nalu::DynamicScheduleType = typedef Kokkos::Schedule<Kokkos::Dynamic>

typedef std::vector<EquationSystem *> sierra::nalu::EquationSystemVector

typedef std::set<FieldInfo,FieldInfoLess> sierra::nalu::FieldSet

typedef stk::mesh::Field<double, stk::mesh::SimpleArrayTag> sierra::nalu::GenericFieldType

typedef stk::mesh::Field<stk::mesh::EntityId> sierra::nalu::GlobalIdFieldType

using sierra::nalu::HostSpace = typedef Kokkos::HostSpace

typedef std::vector<InitialCondition *> sierra::nalu::InitialConditionVector

typedef unsigned sierra::nalu::LocalId

typedef stk::mesh::Field<LocalId> sierra::nalu::LocalIdFieldType

typedef std::vector<MaterialProperty *> sierra::nalu::MaterialPropertyVector

typedef boost::unordered_map<stk::mesh::EntityId, size_t> sierra::nalu::MyLIDMapType

using sierra::nalu::ordinal_type = typedef int

typedef stk::search::Point< double > sierra::nalu::Point

typedef std::vector<Realm *> sierra::nalu::RealmVector

using sierra::nalu::ScalarAlignedVector = typedef AlignedVector<DoubleType>

typedef stk::mesh::Field<double> sierra::nalu::ScalarFieldType

typedef stk::mesh::Field<int> sierra::nalu::ScalarIntFieldType

template<typename T >

using sierra::nalu::SharedMemView = typedef Kokkos::View<T, Kokkos::LayoutRight, DeviceShmem, Kokkos::MemoryUnmanaged>

typedef stk::simd::Double sierra::nalu::SimdDouble

typedef stk::search::Sphere< double > sierra::nalu::Sphere

typedef std::pair<Sphere,theEntityKey> sierra::nalu::sphereBoundingBox

using sierra::nalu::TeamHandleType = typedef Kokkos::TeamPolicy<DeviceSpace, DynamicScheduleType>::member_type

typedef stk::search::IdentProc<stk::mesh::EntityKey,int> sierra::nalu::theEntityKey

typedef stk::search::IdentProc< uint64_t, int > sierra::nalu::theKey

typedef stk::mesh::Field<double, stk::mesh::Cartesian> sierra::nalu::VectorFieldType

Enumeration Type Documentation

enum sierra::nalu::ActuatorType

Enumerator
ActLinePointDrag
ActLineFAST
ActuatorType_END

enum sierra::nalu::AlgorithmType

Enumerator
INTERIOR
INFLOW
WALL
OPEN
MASS
SRC
SYMMETRY
WALL_HF
WALL_CHT
WALL_RAD
NON_CONFORMAL
ELEM_SOURCE
OVERSET
WALL_ABL
REF_PRESSURE	Set the reference pressure at a node. Used only for continuity equation system. This needs to be the last algorithm applied to the linear system because it resets the row and overwrites contributions from other algorithms at this node. See also FixPressureAtNodeAlgorithm

enum sierra::nalu::BoundaryConditionType

Enumerator
INFLOW_BC
OPEN_BC
WALL_BC
SYMMETRY_BC
PERIODIC_BC
NON_CONFORMAL_BC
OVERSET_BC

enum sierra::nalu::COORDS_TYPES

Enumerator
CURRENT_COORDINATES
MODEL_COORDINATES
MAX_COORDS_TYPES

enum sierra::nalu::ELEM_DATA_NEEDED

Enumerator
SCS_AREAV
SCS_GRAD_OP
SCS_SHIFTED_GRAD_OP
SCS_GIJ
SCV_VOLUME
FEM_GRAD_OP
FEM_SHIFTED_GRAD_OP

enum sierra::nalu::EquationType

Enumerator
EQ_MOMENTUM
EQ_CONTINUITY
EQ_MIXTURE_FRACTION
EQ_TURBULENT_KE
EQ_TEMPERATURE
EQ_INTENSITY
EQ_ENTHALPY
EQ_MESH_DISPLACEMENT
EQ_SPEC_DISS_RATE
EQ_MASS_FRACTION
EQ_PNG
EQ_PNG_P
EQ_PNG_Z
EQ_PNG_H
EQ_PNG_U
EQ_PNG_TKE
EquationSystemType_END

enum sierra::nalu::ErrorIndicatorType

Enumerator
EIT_NONE
EIT_PSTAB
EIT_LIMITER
EIT_SIMPLE_BASE
EIT_SIMPLE_VORTICITY
EIT_SIMPLE_VORTICITY_DX
EIT_SIMPLE_DUDX2

enum sierra::nalu::MaterialPropertyType

Enumerator
CONSTANT_MAT
MIXFRAC_MAT
POLYNOMIAL_MAT
IDEAL_GAS_T_MAT
GEOMETRIC_MAT
IDEAL_GAS_T_P_MAT
HDF5_TABLE_MAT
IDEAL_GAS_YK_MAT
GENERIC
MaterialPropertyType_END

enum sierra::nalu::NaluState

Enumerator
NALU_STATE_N
NALU_STATE_NM1

enum sierra::nalu::PetraType

Enumerator
PT_TPETRA
PT_END

enum sierra::nalu::PropertyIdentifier

Enumerator
DENSITY_ID
VISCOSITY_ID
SPEC_HEAT_ID
THERMAL_COND_ID
ABSORBTION_COEFF_ID
ENTHALPY_ID
LAME_MU_ID
LAME_LAMBDA_ID
SCATTERING_COEFF_ID
PropertyIdentifier_END

enum sierra::nalu::TurbulenceModel

Enumerator
LAMINAR
KSGS
SMAGORINSKY
WALE
SST
SST_DES
TurbulenceModel_END

enum sierra::nalu::TurbulenceModelConstant

Enumerator
TM_cMu
TM_kappa
TM_cDESke
TM_cDESkw
TM_tkeProdLimitRatio
TM_cmuEps
TM_cEps
TM_betaStar
TM_aOne
TM_betaOne
TM_betaTwo
TM_gammaOne
TM_gammaTwo
TM_sigmaKOne
TM_sigmaKTwo
TM_sigmaWOne
TM_sigmaWTwo
TM_cmuCs
TM_Cw
TM_CbTwo
TM_SDRWallFactor
TM_END

enum sierra::nalu::UserDataType

Enumerator
CONSTANT_UD
FUNCTION_UD
USER_SUB_UD
UserDataType_END

Function Documentation

void sierra::nalu::add_downward_relations	(	const stk::mesh::BulkData &	bulk,
		std::vector< stk::mesh::EntityKey > &	entityKeys
	)

Referenced by communicate_to_fill_recv_ghosts_to_remove().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::adjugate_matrix33	(	const ScalarType	jact[3][3],
		ScalarType	adjJac[3][3]
	)

Referenced by sierra::nalu::anonymous_namespace{Hex8FEM.C}::generic_grad_op_3d().

stk::mesh::PartVector sierra::nalu::append_super_elems_to_part_vector ( stk::mesh::PartVector parts )

stk::mesh::PartVector sierra::nalu::base_edge_parts ( const stk::mesh::PartVector & parts )

References base_ranked_parts().

Referenced by sierra::nalu::promotion::internal::promote_elements_hex(), and sierra::nalu::promotion::internal::promote_elements_quad().

stk::mesh::Part * sierra::nalu::base_elem_part_from_super_elem_part ( const stk::mesh::Part & super_elem_part )

References base_element_part_name().

Referenced by sierra::nalu::PromotedElementIO::write_elem_block_definitions().

stk::mesh::PartVector sierra::nalu::base_elem_parts ( const stk::mesh::PartVector & parts )

References base_ranked_parts().

Referenced by sierra::nalu::promotion::internal::promote_elements_hex(), sierra::nalu::promotion::internal::promote_elements_quad(), and super_elem_part_vector().

std::string sierra::nalu::base_element_part_name ( std::string super_name )

References super_element_suffix().

Referenced by base_elem_part_from_super_elem_part().

stk::mesh::PartVector sierra::nalu::base_face_parts ( const stk::mesh::PartVector & parts )

References base_ranked_parts().

Referenced by sierra::nalu::promotion::internal::promote_elements_hex().

stk::mesh::PartVector sierra::nalu::base_ranked_parts	(	const stk::mesh::PartVector &	parts,
		stk::topology::rank_t	rank,
		bool	with_subsets
	)

References is_super(), and part_vector_is_valid_and_nonempty().

Referenced by base_edge_parts(), base_elem_parts(), and base_face_parts().

void sierra::nalu::basis_funs	(	const int	i,
		const int	p,
		const double	u,
		const vector< double > &	U,
		vector< double > &	N
	)

Referenced by sierra::nalu::BSpline1D::compute_control_pts(), and sierra::nalu::BSpline1D::value().

template<class LOOP_BODY >

void sierra::nalu::bucket_loop	(	const stk::mesh::BucketVector &	buckets,
		LOOP_BODY	inner_loop_body
	)

Referenced by PromoteElementQuadTestV2::compute_dual_nodal_volume(), PromoteElementHexTestV2::compute_dual_nodal_volume(), PromoteElementQuadTestV2::compute_projected_nodal_gradient_boundary(), PromoteElementHexTestV2::compute_projected_nodal_gradient_boundary(), PromoteElementQuadTestV2::compute_projected_nodal_gradient_interior(), PromoteElementHexTestV2::compute_projected_nodal_gradient_interior(), sierra::nalu::promotion::internal::connectivity_map_for_parent_rank(), sierra::nalu::promotion::internal::create_boundary_elements(), sierra::nalu::promotion::internal::create_super_elements(), PromoteElementHexTestV2::dump_coords(), sierra::nalu::promotion::internal::exposed_side_to_super_elem_map(), PromoteElementQuadTestV2::initialize_linear_scalar_field(), PromoteElementHexTestV2::initialize_linear_scalar_field(), sierra::nalu::promotion::internal::make_base_nodes_to_elem_map_at_boundary(), sierra::nalu::promotion::internal::set_coordinates_hex(), sierra::nalu::promotion::internal::set_coordinates_quad(), PromoteElementQuadTestV2::SetUp(), PromoteElementHexTestV2::SetUp(), and TEST_F().

template<template< typename > class T, int order, typename... Args>

Kernel* sierra::nalu::build_ho_kernel	(	int	dimension,
		Args &&...	args
	)

std::pair<AssembleElemSolverAlgorithm*, bool> sierra::nalu::build_or_add_part_to_solver_alg	(	EquationSystem &	eqSys,
		stk::mesh::Part &	part,
		std::map< std::string, SolverAlgorithm * > &	solverAlgs
	)

inline

References sierra::nalu::NaluEnv::naluOutputP0(), sierra::nalu::EquationSystem::realm_, and sierra::nalu::NaluEnv::self().

Referenced by sierra::nalu::TurbKineticEnergyEquationSystem::register_interior_algorithm(), sierra::nalu::MixtureFractionEquationSystem::register_interior_algorithm(), sierra::nalu::HeatCondEquationSystem::register_interior_algorithm(), sierra::nalu::MomentumEquationSystem::register_interior_algorithm(), and sierra::nalu::ContinuityEquationSystem::register_interior_algorithm().

template<template< typename > class T, typename... Args>

Kernel* sierra::nalu::build_topo_kernel	(	int	dimension,
		stk::topology	topo,
		Args &&...	args
	)

References poly_order_from_super_topology(), and USER_POLY_ORDER.

template<template< typename > class T, typename... Args>

bool sierra::nalu::build_topo_kernel_if_requested	(	stk::topology	topo,
		EquationSystem &	eqSys,
		std::vector< Kernel * > &	kernelVec,
		std::string	name,
		Args &&...	args
	)

References sierra::nalu::KernelBuilderLog::add_built_name(), sierra::nalu::KernelBuilderLog::add_valid_name(), sierra::nalu::EquationSystem::eqnTypeName_, sierra::nalu::EquationSystem::realm_, sierra::nalu::KernelBuilderLog::self(), sierra::nalu::Realm::spatialDimension_, and sierra::nalu::EquationSystem::supp_alg_is_requested().

bool sierra::nalu::case_insensitive_compare	(	std::string	s1,
		std::string	s2
	)

Referenced by get_required(), and sierra::nalu::SolutionOptions::load().

bool sierra::nalu::check_part_topo ( const stk::mesh::Part & part )

References sierra::nalu::NaluEnv::naluOutputP0(), and sierra::nalu::NaluEnv::self().

Referenced by check_parts_for_promotion().

bool sierra::nalu::check_parts_for_promotion ( const stk::mesh::PartVector & parts )

References check_part_topo(), super_elem_part(), and super_subset_part().

Referenced by sierra::nalu::promotion::internal::promote_elements_hex(), and sierra::nalu::promotion::internal::promote_elements_quad().

std::pair<Teuchos::SerialDenseVector<int, double>, Teuchos::SerialDenseVector<int, double> > sierra::nalu::coefficients_for_lobatto	(	int	order,
		double	xl1,
		double	xl2
	)

References jacobi_recursion_coefficients().

Referenced by gauss_lobatto_legendre_rule().

void sierra::nalu::communicate_to_fill_recv_ghosts_to_remove	(	const stk::mesh::BulkData &	bulk,
		const stk::mesh::EntityProcVec &	sendGhostsToRemove,
		std::vector< stk::mesh::EntityKey > &	recvGhostsToRemove
	)

References add_downward_relations().

Referenced by sierra::nalu::NonConformalManager::compute_precise_ghosting_lists().

void sierra::nalu::copy_and_interleave	(	const std::vector< ScratchViews< double > * > &	data,
		int	simdElems,
		ScratchViews< DoubleType > &	simdData,
		bool	copyMEViews = `true`
	)

inline

References CURRENT_COORDINATES, sierra::nalu::ScratchViews< T >::get_field_views(), sierra::nalu::ScratchViews< T >::get_me_views(), sierra::nalu::ScratchViews< T >::has_coord_field(), interleave_1D(), interleave_2D(), interleave_3D(), interleave_me_views(), and MODEL_COORDINATES.

Referenced by sierra::nalu::AssembleElemSolverAlgorithm::execute(), and unit_test_utils::KokkosMEViews< AlgTraits >::execute().

template<typename T1 , typename T2 >

void sierra::nalu::copy_kokkos_unordered_map	(	const Kokkos::UnorderedMap< T1, T2 > &	src,
		Kokkos::UnorderedMap< T1, T2 > &	dest
	)

Referenced by sierra::nalu::TpetraLinearSystem::expand_unordered_map().

size_t sierra::nalu::count_entities ( const stk::mesh::BucketVector & buckets )

Referenced by sierra::nalu::promotion::internal::connectivity_map_for_parent_rank(), sierra::nalu::promotion::internal::create_boundary_elements(), sierra::nalu::promotion::internal::create_super_elements(), sierra::nalu::PromotedElementIO::put_data_on_node_block(), sierra::nalu::PromotedElementIO::write_coordinate_list(), and sierra::nalu::PromotedElementIO::write_node_block_definitions().

std::unique_ptr<MasterElement> sierra::nalu::create_surface_master_element ( stk::topology topo )

References sierra::nalu::NaluEnv::naluOutputP0(), and sierra::nalu::NaluEnv::self().

Referenced by sierra::nalu::MasterElementRepo::get_surface_master_element().

std::unique_ptr<MasterElement> sierra::nalu::create_surface_master_element	(	stk::topology	topo,
		int	dimension,
		std::string	quadType
	)

References sierra::nalu::ElementDescription::create().

std::unique_ptr<MasterElement> sierra::nalu::create_volume_master_element ( stk::topology topo )

References sierra::nalu::NaluEnv::naluOutputP0(), and sierra::nalu::NaluEnv::self().

Referenced by sierra::nalu::MasterElementRepo::get_volume_master_element().

std::unique_ptr<MasterElement> sierra::nalu::create_volume_master_element	(	stk::topology	topo,
		int	dimension,
		std::string	quadType
	)

References sierra::nalu::ElementDescription::create(), sierra::nalu::NaluEnv::naluOutputP0(), sierra::nalu::NaluEnv::self(), and sierra::nalu::MasterElementRepo::surfaceMeMap_.

template<typename ScalarType >

void sierra::nalu::cross3	(	const ScalarType *	u,
		const ScalarType *	v,
		ScalarType *	cross
	)

Referenced by sierra::nalu::CoriolisSrc::CoriolisSrc().

template<typename ScalarType >

ScalarType sierra::nalu::ddot	(	const ScalarType *	u,
		const ScalarType *	v,
		int	n
	)

Referenced by sierra::nalu::HigherOrderHexSCS::interpolatePoint(), sierra::nalu::HexahedralP2Element::interpolatePoint(), sierra::nalu::HigherOrderQuad2DSCS::interpolatePoint(), sierra::nalu::QuadrilateralP2Element::interpolatePoint(), sierra::nalu::HexahedralP2Element::isInElement(), sierra::nalu::QuadrilateralP2Element::isInElement(), isoparameteric_coordinates_for_point_2d(), and isoparameteric_coordinates_for_point_3d().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION ScalarType sierra::nalu::determinant22 ( const ScalarType * mat )

Referenced by solve22().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION ScalarType sierra::nalu::determinant33 ( const ScalarType * mat )

Referenced by generic_determinant_3d(), invert_matrix33(), and solve33().

double sierra::nalu::dot5	(	const double *	u,
		const double *	v
	)

Referenced by sierra::nalu::PyrSCS::interpolatePoint(), and sierra::nalu::PyrSCS::isInElement().

double sierra::nalu::errorf ( const double x )

This file contains generic mathematical functions that are needed at run-time by our Converter classes.

An implementation of erf() and erfc() are available in math.h, but we would prefer to only link with C++ headers. (These functions are not available in cmath.h.)Compute the error function using series solutions. This returns values with relative error everywhere less than 1.58e-12 when compared to the glibc implementation of erf(). This error occurs at x=3.5 where the solution switches to an asymptotic expansion and recovers ~1.e-16 error above about 4.2 and for all values below 3.5.

Referenced by errorfc(), and inv_errorf().

double sierra::nalu::errorfc ( const double x )

Compute the complementary error function using series solutions.

References errorf().

const YAML::Node sierra::nalu::expect_map	(	const YAML::Node &	node,
		const std::string &	key,
		bool	optional
	)

References expect_type().

Referenced by sierra::nalu::ComputeMdotAlgorithmDriver::ComputeMdotAlgorithmDriver(), YAML::convert< sierra::nalu::WallUserData >::decode(), YAML::convert< sierra::nalu::InflowUserData >::decode(), get_required(), sierra::nalu::MaterialPropertys::load(), sierra::nalu::SolutionOptions::load(), sierra::nalu::EquationSystems::load(), sierra::nalu::Realm::load(), and operator>>().

const YAML::Node sierra::nalu::expect_null	(	const YAML::Node &	node,
		const std::string &	key,
		bool	optional
	)

References expect_type().

Referenced by get_required().

const YAML::Node sierra::nalu::expect_scalar	(	const YAML::Node &	node,
		const std::string &	key,
		bool	optional
	)

References expect_type().

Referenced by get_required().

const YAML::Node sierra::nalu::expect_sequence	(	const YAML::Node &	node,
		const std::string &	key,
		bool	optional
	)

References expect_type().

Referenced by sierra::nalu::ComputeMdotAlgorithmDriver::ComputeMdotAlgorithmDriver(), get_required(), sierra::nalu::PostProcessingInfo::load(), sierra::nalu::MaterialPropertys::load(), sierra::nalu::SolutionOptions::load(), sierra::nalu::TurbulenceAveragingPostProcessing::load(), sierra::nalu::InputOutputRealm::load(), sierra::nalu::EquationSystems::load(), sierra::nalu::ActuatorLinePointDrag::load(), and sierra::nalu::DataProbePostProcessing::load().

const YAML::Node sierra::nalu::expect_type	(	const YAML::Node &	node,
		const std::string &	key,
		YAML::NodeType::value	type,
		bool	optional
	)

these can be used to check and ensure a type of yaml node is as expected

References sierra::nalu::NaluParsingHelper::emit(), sierra::nalu::NaluParsingHelper::line_info(), sierra::nalu::NaluEnv::parallel_rank(), and sierra::nalu::NaluEnv::self().

Referenced by expect_map(), expect_null(), expect_scalar(), expect_sequence(), and get_required().

void sierra::nalu::extract_vector_lane	(	const SharedMemView< DoubleType * > &	simdrhs,
		int	simdIndex,
		SharedMemView< double * > &	rhs
	)

inline

Referenced by sierra::nalu::AssembleElemSolverAlgorithm::execute().

void sierra::nalu::extract_vector_lane	(	const SharedMemView< DoubleType ** > &	simdlhs,
		int	simdIndex,
		SharedMemView< double ** > &	lhs
	)

inline

double sierra::nalu::F_chi ( const double Z )

Compute the quantity:

F_chi(Z) = exp( -2 * ( inv_errorf(1 - 2*Z)^2 ) )

which is a sub-component of an exact solution of scalar dissipation rate from laminar flamelet theory:

Chi = Chi_max * F_chi(Z)

Note that this function only returns F_chi(Z) and not Chi itself.

References inv_errorf().

Referenced by sierra::nalu::FChi::query(), sierra::nalu::ChiConverter::query(), and sierra::nalu::DeltaChiConverter::query().

double sierra::nalu::F_gamma	(	const double	Z,
		const double	Z_st
	)

Compute the quantity F_gamma (and not Gamma itself)

double sierra::nalu::F_gamma	(	const std::vector< double > &	Zpoint,
		std::vector< std::vector< double > >	Z_st,
		std::vector< double >	gamma_st
	)

Compute the value of F_gamma (not Gamma itself) for one or two mixture fractions.

(Three or more mixture fractions are not yet supported.)

References sierra::nalu::Coord2D::distance(), sierra::nalu::Coord2D::x, sierra::nalu::Coord2D::y, and Z.

Referenced by sierra::nalu::FGamma::query(), sierra::nalu::DeltaGammaConverter::query(), and sierra::nalu::FChi::~FChi().

void sierra::nalu::field_axpby	(	const stk::mesh::MetaData &	metaData,
		const stk::mesh::BulkData &	bulkData,
		const double	alpha,
		const stk::mesh::FieldBase &	xField,
		const double	beta,
		const stk::mesh::FieldBase &	yField,
		const bool	auraIsActive,
		const stk::topology::rank_t	entityRankValue
	)

Referenced by sierra::nalu::LowMachEquationSystem::post_adapt_work(), sierra::nalu::MeshDisplacementEquationSystem::solve_and_update(), sierra::nalu::RadiativeTransportEquationSystem::solve_and_update(), sierra::nalu::HeatCondEquationSystem::solve_and_update(), sierra::nalu::LowMachEquationSystem::solve_and_update(), sierra::nalu::EnthalpyEquationSystem::solve_and_update(), sierra::nalu::MassFractionEquationSystem::solve_and_update(), and sierra::nalu::ProjectedNodalGradientEquationSystem::solve_and_update_external().

void sierra::nalu::field_copy	(	const stk::mesh::MetaData &	metaData,
		const stk::mesh::BulkData &	bulkData,
		const stk::mesh::FieldBase &	xField,
		const stk::mesh::FieldBase &	yField,
		const bool	auraIsActive,
		const stk::topology::rank_t	entityRankValue
	)

void sierra::nalu::field_fill	(	const stk::mesh::MetaData &	metaData,
		const stk::mesh::BulkData &	bulkData,
		const double	alpha,
		const stk::mesh::FieldBase &	xField,
		const bool	auraIsActive,
		const stk::topology::rank_t	entityRankValue
	)

Referenced by unit_test_kernel_utils::calc_projected_nodal_gradient(), TestTurbulenceAlgorithm::fill_mesh_and_init_fields(), LowMachKernelHex8Mesh::fill_mesh_and_init_fields(), MomentumKernelHex8Mesh::fill_mesh_and_init_fields(), HeatCondKernelHex8Mesh::fill_mesh_and_init_fields(), Hex8Mesh::fill_mesh_and_initialize_test_fields(), TEST_F(), and sierra::nalu::SurfaceForceAndMomentAlgorithmDriver::zero_fields().

void sierra::nalu::field_index_copy	(	const stk::mesh::MetaData &	metaData,
		const stk::mesh::BulkData &	bulkData,
		const stk::mesh::FieldBase &	xField,
		const int	xFieldIndex,
		const stk::mesh::FieldBase &	yField,
		const int	yFieldIndex,
		const bool	auraIsActive,
		const stk::topology::rank_t	entityRankValue
	)

Referenced by sierra::nalu::MomentumEquationSystem::compute_projected_nodal_gradient(), and sierra::nalu::MassFractionEquationSystem::copy_mass_fraction().

void sierra::nalu::field_scale	(	const stk::mesh::MetaData &	metaData,
		const stk::mesh::BulkData &	bulkData,
		const double	alpha,
		const stk::mesh::FieldBase &	xField,
		const bool	auraIsActive,
		const stk::topology::rank_t	entityRankValue
	)

void sierra::nalu::fill_master_element_views	(	ElemDataRequests &	dataNeeded,
		const stk::mesh::BulkData &	bulkData,
		stk::topology	topo,
		stk::mesh::Entity	elem,
		ScratchViews< DoubleType > &	prereqData
	)

References sierra::nalu::ElemDataRequests::get_coordinates_map(), sierra::nalu::ElemDataRequests::get_cvfem_surface_me(), sierra::nalu::ElemDataRequests::get_cvfem_volume_me(), sierra::nalu::ElemDataRequests::get_data_enums(), sierra::nalu::ElemDataRequests::get_fem_volume_me(), sierra::nalu::ScratchViews< T >::get_me_views(), and sierra::nalu::ScratchViews< T >::get_scratch_view_2D().

Referenced by sierra::nalu::ScratchViews< T >::create_needed_master_element_views(), sierra::nalu::AssembleElemSolverAlgorithm::execute(), and unit_test_utils::KokkosMEViews< AlgTraits >::execute().

void sierra::nalu::fill_pre_req_data	(	ElemDataRequests &	dataNeeded,
		const stk::mesh::BulkData &	bulkData,
		stk::topology	topo,
		stk::mesh::Entity	elem,
		ScratchViews< double > &	prereqData,
		bool	fillMEViews
	)

References sierra::nalu::ScratchViews< T >::elemNodes, gather_elem_node_field(), gather_elem_node_field_3D(), gather_elem_node_tensor_field(), gather_elem_tensor_field(), sierra::nalu::ElemDataRequests::get_coordinates_map(), sierra::nalu::ElemDataRequests::get_cvfem_surface_me(), sierra::nalu::ElemDataRequests::get_cvfem_volume_me(), sierra::nalu::ElemDataRequests::get_data_enums(), sierra::nalu::ElemDataRequests::get_fem_volume_me(), sierra::nalu::ElemDataRequests::get_fields(), sierra::nalu::ScratchViews< T >::get_me_views(), sierra::nalu::ScratchViews< T >::get_scratch_view_1D(), sierra::nalu::ScratchViews< T >::get_scratch_view_2D(), and sierra::nalu::ScratchViews< T >::get_scratch_view_3D().

Referenced by unit_test_kernel_utils::calc_dual_nodal_volume(), unit_test_kernel_utils::calc_mass_flow_rate_scs(), unit_test_kernel_utils::calc_projected_nodal_gradient_boundary(), unit_test_kernel_utils::calc_projected_nodal_gradient_interior(), sierra::nalu::ScratchViews< T >::create_needed_master_element_views(), sierra::nalu::AssembleElemSolverAlgorithm::execute(), unit_test_utils::KokkosMEViews< AlgTraits >::execute(), anonymous_namespace{UnitTestSuppAlgDataSharing.C}::TestAlgorithm::execute(), and anonymous_namespace{UnitTestElemSuppAlg.C}::TestElemAlgorithmWithSuppAlgViews::execute().

void sierra::nalu::fill_send_ghosts_to_remove_from_ghosting	(	const stk::mesh::EntityProcVec &	curSendGhosts,
		const stk::mesh::EntityProcVec &	intersection,
		stk::mesh::EntityProcVec &	sendGhostsToRemove
	)

Referenced by sierra::nalu::NonConformalManager::compute_precise_ghosting_lists().

int sierra::nalu::find_indx	(	const int	n,
		const int	p,
		const double	u,
		const vector< double > &	U
	)

Referenced by sierra::nalu::BSpline1D::compute_control_pts(), sierra::nalu::BSpline1D::value(), sierra::nalu::BSpline2D::value(), sierra::nalu::BSpline3D::value(), sierra::nalu::BSpline4D::value(), and sierra::nalu::BSpline5D::value().

void sierra::nalu::gather_elem_node_field	(	const stk::mesh::FieldBase &	field,
		int	numNodes,
		const stk::mesh::Entity *	elemNodes,
		SharedMemView< double * > &	shmemView
	)

inline

Referenced by fill_pre_req_data().

void sierra::nalu::gather_elem_node_field	(	const stk::mesh::FieldBase &	field,
		int	numNodes,
		int	scalarsPerNode,
		const stk::mesh::Entity *	elemNodes,
		SharedMemView< double ** > &	shmemView
	)

inline

void sierra::nalu::gather_elem_node_field_3D	(	const stk::mesh::FieldBase &	field,
		int	numNodes,
		const stk::mesh::Entity *	elemNodes,
		SharedMemView< double ** > &	shmemView
	)

inline

Referenced by fill_pre_req_data().

void sierra::nalu::gather_elem_node_tensor_field	(	const stk::mesh::FieldBase &	field,
		int	numNodes,
		int	tensorDim1,
		int	tensorDim2,
		const stk::mesh::Entity *	elemNodes,
		SharedMemView< double *** > &	shmemView
	)

inline

Referenced by fill_pre_req_data().

void sierra::nalu::gather_elem_tensor_field	(	const stk::mesh::FieldBase &	field,
		stk::mesh::Entity	elem,
		int	tensorDim1,
		int	tensorDim2,
		SharedMemView< double ** > &	shmemView
	)

inline

Referenced by fill_pre_req_data().

std::pair< std::vector< double >, std::vector< double > > sierra::nalu::gauss_legendre_rule ( int order )

References jacobi_recursion_coefficients(), and Z.

Referenced by sierra::nalu::HexahedralP2Element::set_quadrature_rule(), sierra::nalu::QuadrilateralP2Element::set_quadrature_rule(), sierra::nalu::SGLQuadratureOps::SGLQuadratureOps(), and sierra::nalu::TensorProductQuadratureRule::TensorProductQuadratureRule().

std::pair< std::vector< double >, std::vector< double > > sierra::nalu::gauss_lobatto_legendre_rule	(	int	order,
		double	xleft,
		double	xright
	)

References coefficients_for_lobatto(), and Z.

Referenced by sierra::nalu::ElementDescription::create(), sierra::nalu::Lagrange1D::Lagrange1D(), and SGL_quadrature_rule().

template<typename AlgTraits , typename GradViewType , typename CoordViewType , typename OutputViewType >

void sierra::nalu::generic_determinant_3d	(	GradViewType	referenceGradWeights,
		CoordViewType	coords,
		OutputViewType	detj
	)

References determinant33().

template<typename AlgTraits , typename GradViewType , typename CoordViewType , typename OutputViewType >

void sierra::nalu::generic_gij_3d	(	GradViewType	referenceGradWeights,
		CoordViewType	coords,
		OutputViewType	gup,
		OutputViewType	glo
	)

template<typename AlgTraits , typename GradViewType , typename CoordViewType , typename OutputViewType >

void sierra::nalu::generic_grad_op_3d	(	GradViewType	referenceGradWeights,
		CoordViewType	coords,
		OutputViewType	weights
	)

References tiny_positive_value().

SharedMemView<stk::mesh::Entity*> sierra::nalu::get_entity_shmem_view_1D	(	const TeamHandleType &	team,
		size_t	len
	)

inline

template<typename T >

void sierra::nalu::get_if_present	(	const YAML::Node &	node,
		const std::string &	key,
		T &	result,
		const T &	default_if_not_present = `T()`
	)

Set.

Parameters

result	if the
key	is present in the
node,else	set it to the given default value

template<typename T >

void sierra::nalu::get_if_present_no_default	(	const YAML::Node &	node,
		const std::string &	key,
		T &	result
	)

this version doesn't change

Parameters

result	unless the
key	is present in the
node

Referenced by sierra::nalu::LinearSolvers::load(), sierra::nalu::MaterialPropertys::load(), and sierra::nalu::EquationSystems::load().

SharedMemView<int*> sierra::nalu::get_int_shmem_view_1D	(	const TeamHandleType &	team,
		size_t	len
	)

inline

Referenced by sierra::nalu::AssembleElemSolverAlgorithm::execute().

template<typename T = double>

int sierra::nalu::get_num_bytes_pre_req_data	(	ElemDataRequests &	dataNeededBySuppAlgs,
		int	nDim
	)

References get_num_scalars_pre_req_data().

Referenced by unit_test_kernel_utils::calc_dual_nodal_volume(), unit_test_kernel_utils::calc_mass_flow_rate_scs(), unit_test_kernel_utils::calc_projected_nodal_gradient_boundary(), unit_test_kernel_utils::calc_projected_nodal_gradient_interior(), anonymous_namespace{UnitTestSuppAlgDataSharing.C}::TestAlgorithm::execute(), and anonymous_namespace{UnitTestElemSuppAlg.C}::TestElemAlgorithmWithSuppAlgViews::execute().

int sierra::nalu::get_num_scalars_pre_req_data	(	ElemDataRequests &	dataNeededBySuppAlgs,
		int	nDim
	)

References FEM_GRAD_OP, FEM_SHIFTED_GRAD_OP, sierra::nalu::ElemDataRequests::get_coordinates_map(), sierra::nalu::ElemDataRequests::get_cvfem_surface_me(), sierra::nalu::ElemDataRequests::get_cvfem_volume_me(), sierra::nalu::ElemDataRequests::get_data_enums(), sierra::nalu::ElemDataRequests::get_fem_volume_me(), sierra::nalu::ElemDataRequests::get_fields(), sierra::nalu::MasterElement::nodesPerElement_, sierra::nalu::MasterElement::numIntPoints_, SCS_AREAV, SCS_GIJ, SCS_GRAD_OP, SCS_SHIFTED_GRAD_OP, and SCV_VOLUME.

Referenced by sierra::nalu::ScratchViews< T >::create_needed_master_element_views(), and get_num_bytes_pre_req_data().

template<typename T >

void sierra::nalu::get_required	(	const YAML::Node &	node,
		const std::string &	key,
		T &	result
	)

this version requires the

Parameters

key	to be present

References case_insensitive_compare(), sierra::nalu::NaluParsingHelper::emit(), expect_map(), expect_null(), expect_scalar(), expect_sequence(), expect_type(), sierra::nalu::NaluParsingHelper::line_info(), operator>>(), sierra::nalu::NaluEnv::parallel_rank(), anonymous_namespace{UnitTestContinuityAdvElem.C}::hex8_golds::advection_default::rhs, and sierra::nalu::NaluEnv::self().

Referenced by sierra::nalu::MaterialPropertys::load(), sierra::nalu::SolutionOptions::load(), sierra::nalu::EquationSystems::load(), and sierra::nalu::EquationSystem::load().

template<typename AlgTraits , typename LambdaFunction , typename ViewType >

void sierra::nalu::get_scs_shape_fn_data	(	LambdaFunction	lambdaFunction,
		ViewType &	shape_fn_view
	)

template<typename AlgTraits , typename LambdaFunction , typename ViewType >

void sierra::nalu::get_scv_shape_fn_data	(	LambdaFunction	lambdaFunction,
		ViewType &	shape_fn_view
	)

template<typename T >

SharedMemView<T*> sierra::nalu::get_shmem_view_1D	(	const TeamHandleType &	team,
		size_t	len
	)

template<typename T >

SharedMemView<T**> sierra::nalu::get_shmem_view_2D	(	const TeamHandleType &	team,
		size_t	len1,
		size_t	len2
	)

template<typename T >

SharedMemView<T***> sierra::nalu::get_shmem_view_3D	(	const TeamHandleType &	team,
		size_t	len1,
		size_t	len2,
		size_t	len3
	)

DeviceTeamPolicy sierra::nalu::get_team_policy	(	const size_t	sz,
		const size_t	bytes_per_team,
		const size_t	bytes_per_thread
	)

inline

Referenced by unit_test_kernel_utils::calc_dual_nodal_volume(), unit_test_kernel_utils::calc_mass_flow_rate_scs(), unit_test_kernel_utils::calc_projected_nodal_gradient_boundary(), unit_test_kernel_utils::calc_projected_nodal_gradient_interior(), sierra::nalu::AssembleElemSolverAlgorithm::execute(), unit_test_utils::KokkosMEViews< AlgTraits >::execute(), anonymous_namespace{UnitTestSuppAlgDataSharing.C}::TestAlgorithm::execute(), anonymous_namespace{UnitTestElemSuppAlg.C}::TestElemAlgorithmWithSuppAlgViews::execute(), and anonymous_namespace{UnitTestKokkosViews.C}::TestElemAlgorithmWithViews::execute().

double sierra::nalu::get_uk	(	const double	indepVar,
		const double	maxIndepVarVal,
		const double	minIndepVarVal,
		const bool	clipExtrema
	)

Referenced by set_uk(), sierra::nalu::BSpline1D::value(), sierra::nalu::BSpline2D::value(), sierra::nalu::BSpline3D::value(), sierra::nalu::BSpline4D::value(), and sierra::nalu::BSpline5D::value().

template<typename RealType >

RealType sierra::nalu::hex_volume_grandy ( RealType scvcoords[8][3] )

The Grandy algorithm for computing the volume of a multilinear box

"Efficient computation of volume ofl Hexahedral Cells", Jeffrey Grandy, LLNL, UCRL-ID-128886, October 30, 1997.

Referenced by sierra::nalu::HexSCV::determinant(), and TEST().

sierra::nalu::INSTANTIATE_KERNEL ( SteadyThermal3dContactSrcElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumBuoyancySrcElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumBuoyancyBoussinesqSrcElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( TurbKineticEnergyKsgsSrcElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ScalarDiffElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ScalarDiffFemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ContinuityMassElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ScalarAdvDiffElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumCoriolisSrcElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ScalarMassElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ContinuityAdvElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumMassElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumAdvDiffElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumNSOSijElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumNSOKeElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ScalarNSOElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( ScalarUpwAdvDiffElemKernel )

sierra::nalu::INSTANTIATE_KERNEL ( MomentumNSOElemKernel )

template<typename DTYPE >

void sierra::nalu::interleave_1D	(	SharedMemView< DTYPE * > &	dview,
		const SharedMemView< double * > &	sview,
		int	simdIndex
	)

Referenced by copy_and_interleave(), interleave_1D(), and interleave_me_views().

template<typename DTYPE >

void sierra::nalu::interleave_1D	(	SharedMemView< DTYPE * > &	dview,
		const double *	sviews[],
		int	simdElems
	)

void sierra::nalu::interleave_1D	(	ViewHolder *	dest,
		const ViewHolder *	sviews[],
		int	simdElems
	)

inline

References interleave_1D().

template<typename DTYPE >

void sierra::nalu::interleave_2D	(	SharedMemView< DTYPE ** > &	dview,
		const SharedMemView< double ** > &	sview,
		int	simdIndex
	)

Referenced by copy_and_interleave(), interleave_2D(), and interleave_me_views().

template<typename DTYPE >

void sierra::nalu::interleave_2D	(	SharedMemView< DTYPE ** > &	dview,
		const double *	sviews[],
		int	simdElems
	)

void sierra::nalu::interleave_2D	(	ViewHolder *	dest,
		const ViewHolder *	sviews[],
		int	simdElems
	)

inline

References interleave_2D().

template<typename DTYPE >

void sierra::nalu::interleave_3D	(	SharedMemView< DTYPE *** > &	dview,
		const SharedMemView< double *** > &	sview,
		int	simdIndex
	)

Referenced by copy_and_interleave(), interleave_3D(), and interleave_me_views().

template<typename DTYPE >

void sierra::nalu::interleave_3D	(	SharedMemView< DTYPE *** > &	dview,
		const double *	sviews[],
		int	simdElems
	)

void sierra::nalu::interleave_3D	(	ViewHolder *	dest,
		const ViewHolder *	sviews[],
		int	simdElems
	)

inline

References interleave_3D().

void sierra::nalu::interleave_me_views	(	MasterElementViews< DoubleType > &	dest,
		const MasterElementViews< double > &	src,
		int	simdIndex
	)

inline

Referenced by copy_and_interleave().

double sierra::nalu::inv_errorf ( const double x )

Compute the inverse error function using Newton's method.

Accuracy will be full machine precision for all inputs except values just a couple significant figures below 1.0, where relative accuracy will fall to about 1.e-5.

References errorf().

Referenced by F_chi().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::invert_matrix33	(	const ScalarType	A[3][3],
		ScalarType	Ainv[3][3]
	)

References determinant33().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::invert_matrix33	(	const ScalarType *POINTER_RESTRICT	A,
		ScalarType *POINTER_RESTRICT	Ainv
	)

References determinant33().

bool sierra::nalu::is_side ( const stk::mesh::Part * p )

Referenced by is_super_side(), and only_super_side_parts().

bool sierra::nalu::is_super ( const stk::mesh::Part * p )

Referenced by base_ranked_parts(), is_super_side(), only_super_parts(), and only_super_side_parts().

bool sierra::nalu::is_super_side ( const stk::mesh::Part * p )

References is_side(), and is_super().

bool sierra::nalu::isoparameteric_coordinates_for_point_2d	(	sierra::nalu::LagrangeBasis &	basis,
		const double *POINTER_RESTRICT	elemNodalCoords,
		const double *POINTER_RESTRICT	pointCoord,
		double *POINTER_RESTRICT	isoParCoord,
		std::array< double, 2 >	initialGuess,
		int	maxIter,
		double	tol,
		double	deltaLimit
	)

References ddot(), sierra::nalu::LagrangeBasis::num_nodes(), sierra::nalu::LagrangeBasis::point_derivative_weights(), sierra::nalu::LagrangeBasis::point_interpolation_weights(), solve22(), and vecnorm_sq2().

Referenced by sierra::nalu::HigherOrderQuad2DSCS::isInElement().

bool sierra::nalu::isoparameteric_coordinates_for_point_3d	(	sierra::nalu::LagrangeBasis &	basis,
		const double *POINTER_RESTRICT	elemNodalCoords,
		const double *POINTER_RESTRICT	pointCoord,
		double *POINTER_RESTRICT	isoParCoord,
		std::array< double, 3 >	initialGuess,
		int	maxIter,
		double	tol,
		double	deltaLimit
	)

References ddot(), sierra::nalu::LagrangeBasis::num_nodes(), sierra::nalu::LagrangeBasis::point_derivative_weights(), sierra::nalu::LagrangeBasis::point_interpolation_weights(), solve33(), and vecnorm_sq3().

Referenced by sierra::nalu::HigherOrderHexSCS::isInElement().

std::pair<Teuchos::SerialDenseVector<int, double>, Teuchos::SerialDenseVector<int, double> > sierra::nalu::jacobi_recursion_coefficients	(	const double	alpha,
		const double	beta,
		const int	order
	)

Referenced by coefficients_for_lobatto(), and gauss_legendre_rule().

void sierra::nalu::keep_elems_not_already_ghosted	(	const stk::mesh::BulkData &	bulk,
		const stk::mesh::EntityProcVec &	alreadyGhosted,
		stk::mesh::EntityProcVec &	elemsToGhost
	)

Referenced by sierra::nalu::NonConformalManager::compute_precise_ghosting_lists().

void sierra::nalu::keep_only_elems	(	const stk::mesh::BulkData &	bulk,
		stk::mesh::EntityProcVec &	entityProcs
	)

Referenced by sierra::nalu::NonConformalManager::compute_precise_ghosting_lists().

template<typename SizeType , class Function >

void sierra::nalu::kokkos_parallel_for	(	const std::string &	debuggingName,
		SizeType	n,
		Function	loop_body
	)

Referenced by sierra::nalu::TpetraLinearSystem::beginLinearSystemConstruction(), sierra::nalu::TpetraLinearSystem::checkForZeroRow(), and sierra::nalu::TpetraLinearSystem::compute_graph_row_lengths().

template<typename SizeType , class Function , typename ReduceType >

void sierra::nalu::kokkos_parallel_reduce	(	SizeType	n,
		Function	loop_body,
		ReduceType &	reduce,
		const std::string &	debuggingName
	)

Referenced by sierra::nalu::TpetraLinearSystem::buildEdgeToNodeGraph(), sierra::nalu::TpetraLinearSystem::buildFaceElemToNodeGraph(), sierra::nalu::TpetraLinearSystem::buildFaceToNodeGraph(), sierra::nalu::TpetraLinearSystem::buildNodeGraph(), and sierra::nalu::TpetraLinearSystem::buildReducedElemToNodeGraph().

template<typename T , typename... Args>

std::unique_ptr<T> sierra::nalu::make_unique ( Args &&... args )

template<typename Scalar >

void sierra::nalu::mat_chunk	(	const Scalar *	mat,
		int	nrows,
		Scalar *	chunk,
		int	istart,
		int	jstart,
		int	iend,
		int	jend
	)

Referenced by sierra::nalu::ElementCondenser::compute_interior_update(), and sierra::nalu::ElementCondenser::condense().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::matvec22	(	const ScalarType *	A,
		const ScalarType *	x,
		ScalarType *	b
	)

Referenced by anonymous_namespace{UnitTestMetricTensor.C}::test_metric_for_topo_2D().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::matvec33	(	const ScalarType *	A,
		const ScalarType *	x,
		ScalarType *	b
	)

Referenced by TEST(), and anonymous_namespace{UnitTestMetricTensor.C}::test_metric_for_topo_3D().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::mxm22	(	const ScalarType *	A,
		const ScalarType *	B,
		ScalarType *	C
	)

Referenced by anonymous_namespace{UnitTestMetricTensor.C}::test_metric_for_topo_2D().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::mxm33	(	const ScalarType *	A,
		const ScalarType *	B,
		ScalarType *	C
	)

Referenced by TEST(), and anonymous_namespace{UnitTestMetricTensor.C}::test_metric_for_topo_3D().

template<int p>

constexpr int sierra::nalu::nGL ( )

stk::mesh::PartVector sierra::nalu::only_super_elem_parts ( const stk::mesh::PartVector & parts )

References part_vector_is_valid_and_nonempty().

Referenced by TEST().

stk::mesh::PartVector sierra::nalu::only_super_parts ( const stk::mesh::PartVector & parts )

References is_super(), and part_vector_is_valid_and_nonempty().

stk::mesh::PartVector sierra::nalu::only_super_side_parts ( const stk::mesh::PartVector & parts )

References is_side(), is_super(), and part_vector_is_valid_and_nonempty().

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		WallBoundaryConditionData &	wallBC
	)

References sierra::nalu::BoundaryCondition::bcName_, sierra::nalu::BoundaryCondition::targetName_, sierra::nalu::BoundaryCondition::theBcType_, sierra::nalu::WallBoundaryConditionData::userData_, and WALL_BC.

Referenced by get_required().

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		InflowBoundaryConditionData &	inflowBC
	)

References sierra::nalu::BoundaryCondition::bcName_, INFLOW_BC, sierra::nalu::BoundaryCondition::targetName_, sierra::nalu::BoundaryCondition::theBcType_, and sierra::nalu::InflowBoundaryConditionData::userData_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		OpenBoundaryConditionData &	openBC
	)

References sierra::nalu::BoundaryCondition::bcName_, OPEN_BC, sierra::nalu::BoundaryCondition::targetName_, sierra::nalu::BoundaryCondition::theBcType_, and sierra::nalu::OpenBoundaryConditionData::userData_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		OversetBoundaryConditionData &	oversetBC
	)

References sierra::nalu::BoundaryCondition::bcName_, OVERSET_BC, sierra::nalu::BoundaryCondition::theBcType_, and sierra::nalu::OversetBoundaryConditionData::userData_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		SymmetryBoundaryConditionData &	symmetryBC
	)

References sierra::nalu::BoundaryCondition::bcName_, SYMMETRY_BC, sierra::nalu::BoundaryCondition::targetName_, sierra::nalu::BoundaryCondition::theBcType_, and sierra::nalu::SymmetryBoundaryConditionData::userData_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		PeriodicBoundaryConditionData &	periodicBC
	)

References sierra::nalu::BoundaryCondition::bcName_, sierra::nalu::MasterSlave::master_, sierra::nalu::PeriodicBoundaryConditionData::masterSlave_, PERIODIC_BC, sierra::nalu::MasterSlave::slave_, sierra::nalu::BoundaryCondition::targetName_, sierra::nalu::BoundaryCondition::theBcType_, and sierra::nalu::PeriodicBoundaryConditionData::userData_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		NonConformalBoundaryConditionData &	nonConformalBC
	)

References sierra::nalu::BoundaryCondition::bcName_, sierra::nalu::NonConformalBoundaryConditionData::currentPartNameVec_, NON_CONFORMAL_BC, sierra::nalu::NonConformalBoundaryConditionData::opposingPartNameVec_, sierra::nalu::BoundaryCondition::targetName_, sierra::nalu::BoundaryCondition::theBcType_, and sierra::nalu::NonConformalBoundaryConditionData::userData_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		UserFunctionInitialConditionData &	fcnIC
	)

References expect_map(), FUNCTION_UD, sierra::nalu::UserFunctionInitialConditionData::functionNames_, sierra::nalu::UserFunctionInitialConditionData::functionParams_, sierra::nalu::InitialCondition::icName_, sierra::nalu::InitialCondition::targetNames_, and sierra::nalu::InitialCondition::theIcType_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		ConstantInitialConditionData &	constIC
	)

References CONSTANT_UD, sierra::nalu::ConstantInitialConditionData::data_, sierra::nalu::Simulation::debug(), sierra::nalu::ConstantInitialConditionData::fieldNames_, sierra::nalu::InitialCondition::icName_, sierra::nalu::NaluEnv::naluOutputP0(), sierra::nalu::InitialCondition::root(), sierra::nalu::NaluEnv::self(), sierra::nalu::InitialCondition::targetNames_, and sierra::nalu::InitialCondition::theIcType_.

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		std::map< std::string, bool > &	mapName
	)

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		std::map< std::string, double > &	mapName
	)

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		std::map< std::string, std::string > &	mapName
	)

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		std::map< std::string, std::vector< std::string > > &	mapName
	)

void sierra::nalu::operator>>	(	const YAML::Node &	node,
		std::map< std::string, std::vector< double > > &	mapName
	)

std::vector< double > sierra::nalu::pad_end_points	(	std::vector< double >	x,
		double	xleft,
		double	xright
	)

Referenced by sierra::nalu::SGLQuadratureOps::SGLQuadratureOps(), and sierra::nalu::TensorProductQuadratureRule::TensorProductQuadratureRule().

double sierra::nalu::parametric_distance_hex ( const double * x )

Referenced by sierra::nalu::HigherOrderHexSCS::isInElement().

double sierra::nalu::parametric_distance_quad ( const double * x )

Referenced by sierra::nalu::HigherOrderQuad2DSCS::isInElement().

bool sierra::nalu::part_vector_is_valid_and_nonempty ( const stk::mesh::PartVector & parts )

Referenced by base_ranked_parts(), sierra::nalu::promotion::internal::exposed_side_to_super_elem_map(), only_super_elem_parts(), only_super_parts(), only_super_side_parts(), sierra::nalu::PromotedElementIO::PromotedElementIO(), and transform_to_super_elem_part_vector().

int sierra::nalu::poly_order_from_super_topology	(	int	dimension,
		stk::topology	superTopo
	)

"super topologies" in STK are essentially just the number of nodes in the element. Even restricting ourselves to quads/hexs, we need slightly more information to reconstruct the ElementDescription—namely the dimension.

Alternatively, we could restrict the valid polynomial orders to be < 7, and then we could base everything on topology alone

Referenced by build_topo_kernel(), and sierra::nalu::ElementDescription::create().

template<typename ViewType >

void sierra::nalu::quad_area_by_triangulation	(	int	ics,
		const typename ViewType::value_type	areacoords[4][3],
		const ViewType &	area
	)

Form up the area vector consistently with the triangulation used in the Grandy algorithm, on each subcontrol volume hex

"Efficient computation of volume of Hexahedral Cells", Jeffrey Grandy, LLNL, UCRL-ID-128886, October 30, 1997.

Referenced by sierra::nalu::HexSCS::determinant().

int sierra::nalu::set_knot_vector	(	const vector< double > &	uk,
		const int	order,
		vector< double > &	knots
	)

Referenced by sierra::nalu::BSpline1D::compute_control_pts().

void sierra::nalu::set_uk	(	const vector< double > &	indepVars,
		vector< double > &	uk,
		const double	maxIndepVarVal,
		const double	minIndepVarVal
	)

References get_uk().

Referenced by sierra::nalu::BSpline1D::compute_control_pts().

std::pair< std::vector< double >, std::vector< double > > sierra::nalu::SGL_quadrature_rule	(	int	order,
		std::vector< double >	scsEndLocations
	)

References gauss_lobatto_legendre_rule(), and subinterval_weights_for_fixed_abscissae().

Referenced by sierra::nalu::SGLQuadratureOps::SGLQuadratureOps(), and sierra::nalu::TensorProductQuadratureRule::TensorProductQuadratureRule().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::solve22	(	const ScalarType *POINTER_RESTRICT	A,
		const ScalarType *POINTER_RESTRICT	b,
		ScalarType *POINTER_RESTRICT	x
	)

References determinant22(), and tiny_positive_value().

Referenced by sierra::nalu::QuadrilateralP2Element::isInElement(), and isoparameteric_coordinates_for_point_2d().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::solve33	(	const ScalarType *POINTER_RESTRICT	A,
		const ScalarType *POINTER_RESTRICT	b,
		ScalarType *POINTER_RESTRICT	x
	)

References determinant33(), and tiny_positive_value().

Referenced by sierra::nalu::HexahedralP2Element::isInElement(), sierra::nalu::PyrSCS::isInElement(), and isoparameteric_coordinates_for_point_3d().

template<typename CoordViewType >

void sierra::nalu::subdivide_hex_8	(	CoordViewType	coords,
		typename CoordViewType::value_type	coordv[27][3]
	)

Subdivide the coordinates of a hex8 element into 8 hexs along edge, face, and volume midpoints

Referenced by sierra::nalu::HexSCV::determinant(), and sierra::nalu::HexSCS::determinant().

Teuchos::SerialDenseVector<int, double> sierra::nalu::subinterval_weights_for_fixed_abscissae	(	std::vector< double >	fixedAbscissae,
		double	xleft,
		double	xright
	)

Referenced by SGL_quadrature_rule().

stk::mesh::Part * sierra::nalu::super_elem_part ( const stk::mesh::Part & part )

References super_element_part_name().

Referenced by check_parts_for_promotion(), sierra::nalu::promotion::internal::create_super_elements(), TEST_F(), and transform_to_super_elem_part_vector().

stk::mesh::Part* sierra::nalu::super_elem_part ( const stk::mesh::Part * part )

References super_element_part_name().

stk::mesh::PartVector sierra::nalu::super_elem_part_vector ( const stk::mesh::PartVector & parts )

References base_elem_parts(), and transform_to_super_elem_part_vector().

Referenced by sierra::nalu::promotion::internal::exposed_side_to_super_elem_map(), and sierra::nalu::PromotedElementIO::PromotedElementIO().

std::string sierra::nalu::super_element_part_name ( std::string base_name )

References super_element_suffix().

Referenced by unit_test_utils::fill_and_promote_hex_mesh(), sierra::nalu::Realm::physics_part_name(), sierra::nalu::Realm::setup_element_promotion(), PromoteElementQuadTestV2::setup_promotion(), PromoteElementHexTestV2::setup_promotion(), and super_elem_part().

std::string sierra::nalu::super_element_suffix ( )

Referenced by base_element_part_name(), super_element_part_name(), and super_subset_part_name().

stk::mesh::Part * sierra::nalu::super_subset_part	(	const stk::mesh::Part &	part,
		int	numElemNodes,
		int	numSideNodes
	)

References super_subset_part_name().

Referenced by check_parts_for_promotion(), and sierra::nalu::promotion::internal::create_boundary_elements().

stk::mesh::Part * sierra::nalu::super_subset_part ( const stk::mesh::Part & part )

References super_subset_part_name().

std::string sierra::nalu::super_subset_part_name ( const std::string & base_name )

References super_element_suffix().

Referenced by unit_test_utils::fill_and_promote_hex_mesh(), sierra::nalu::Realm::setup_element_promotion(), PromoteElementQuadTestV2::setup_promotion(), PromoteElementHexTestV2::setup_promotion(), and super_subset_part().

std::string sierra::nalu::super_subset_part_name	(	const std::string &	base_name,
		int	numElemNodes,
		int	numSideNodes
	)

References super_element_suffix().

constexpr double sierra::nalu::tiny_positive_value ( )

inline

Referenced by sierra::nalu::HigherOrderHexSCV::determinant(), sierra::nalu::Hex27SCV::determinant(), sierra::nalu::HigherOrderQuad2DSCV::determinant(), sierra::nalu::Quad92DSCV::determinant(), sierra::nalu::HigherOrderHexSCS::face_grad_op(), sierra::nalu::Hex27SCS::face_grad_op(), sierra::nalu::HigherOrderQuad2DSCS::face_grad_op(), sierra::nalu::Quad92DSCS::face_grad_op(), sierra::nalu::Hex27SCS::general_face_grad_op(), sierra::nalu::anonymous_namespace{Hex8FEM.C}::generic_grad_op_3d(), generic_grad_op_3d(), sierra::nalu::HigherOrderHexSCS::grad_op(), sierra::nalu::Hex27SCS::grad_op(), sierra::nalu::HigherOrderQuad2DSCS::grad_op(), sierra::nalu::Hex27SCS::shifted_grad_op(), solve22(), and solve33().

void sierra::nalu::transform_to_super_elem_part_vector ( stk::mesh::PartVector & parts )

References part_vector_is_valid_and_nonempty(), and super_elem_part().

Referenced by super_elem_part_vector().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::transpose22	(	const ScalarType *	A,
		ScalarType *	At
	)

Referenced by anonymous_namespace{UnitTestMetricTensor.C}::test_metric_for_topo_2D().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION void sierra::nalu::transpose33	(	const ScalarType *	A,
		ScalarType *	At
	)

Referenced by TEST(), and anonymous_namespace{UnitTestMetricTensor.C}::test_metric_for_topo_3D().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION ScalarType sierra::nalu::vecnorm_sq2 ( const ScalarType * x )

Referenced by isoparameteric_coordinates_for_point_2d().

template<typename ScalarType >

KOKKOS_FORCEINLINE_FUNCTION ScalarType sierra::nalu::vecnorm_sq3 ( const ScalarType * x )

Referenced by sierra::nalu::HexahedralP2Element::isInElement(), and isoparameteric_coordinates_for_point_3d().

Variable Documentation

std::map<std::string, ActuatorType> sierra::nalu::ActuatorTypeMap = { {"ActLinePointDrag",ActuatorType::ActLinePointDrag}, {"ActLineFAST",ActuatorType::ActLineFAST}}

static

Referenced by sierra::nalu::Realm::look_ahead_and_creation().

const std::string sierra::nalu::CoordinatesTypeNames[]

static

Initial value:

= {
  "current_coordinates",
  "model_coordinates"
}

const std::string sierra::nalu::EquationTypeMap[]

static

Initial value:

= {
  "Momentum",
  "Continuity",
  "Mixture_Fraction",
  "Turbulent_KE",
  "Temperature",
  "Intensity",
  "Enthalpy",
  "MeshVelocity",
  "Specific_Dissipation_Rate",
  "Mass_Fraction",
  "PNG",
  "PNG_P",
  "PNG_Z",
  "PNG_H",
  "PNG_U",
  "PNG_TKE"
}

Referenced by sierra::nalu::LinearSolvers::create_solver().

const std::string sierra::nalu::PropertyIdentifierNames[]

static

Initial value:

= {
  "density",
  "viscosity",
  "specific_heat",
  "thermal_conductivity",
  "absorption_coefficient",
  "enthalpy",
  "lame_mu",
  "lame_lambda",
  "scattering_coefficient"}

Referenced by sierra::nalu::MaterialPropertys::load(), and sierra::nalu::Realm::setup_property().

const std::string sierra::nalu::TurbulenceModelConstantNames[]

static

Initial value:

= {
  "cMu",
  "kappa",
  "cDESke",
  "cDESkw",
  "tkeProdLimitRatio",
  "cmuEps",
  "cEps",
  "betaStar",
  "aOne",
  "betaOne",
  "betaTwo",
  "gammaOne",
  "gammaTwo",
  "sigmaKOne",
  "sigmaKTwo",
  "sigmaWOne",
  "sigmaWTwo",
  "cmuCs",
  "Cw",
  "Cb2",
  "SDRWallFactor",
  "END"}

Referenced by sierra::nalu::SolutionOptions::load().

const std::string sierra::nalu::TurbulenceModelNames[]

static

Initial value:

= {
  "laminar",
  "ksgs",
  "smagorinsky",
  "wale",
  "sst",
  "sst_des"}

Referenced by sierra::nalu::SolutionOptions::load().

Namespaces

Classes

Typedefs

Enumerations

Functions

Variables

Typedef Documentation

Enumeration Type Documentation

Function Documentation

Variable Documentation